RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 SCAND2PQ9GZW5 306 aaPredicted RBP16.93■□□□□ 0.3
COL16A1-211ENST00000479100 ATP6V0A4Q9HBG4 840 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 GDPD2Q9HCC8 539 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 SUCLA2Q9P2R7 463 aaPredicted RBP16.93■□□□□ 0.3
COL16A1-211ENST00000479100 CCDC39Q9UFE4 941 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 PCDHA7Q9UN72 937 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 TRPV2Q9Y5S1 764 aa16.93■□□□□ 0.3
COL16A1-211ENST00000479100 RBAK-RBAKDNI3L0D1 243 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 SLC26A4O43511 780 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 DGAT1O75907 488 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 CHRNA1P02708 482 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 PLCG1P19174 1290 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 MKRN4PQ13434 485 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-211ENST00000479100 TMEM119Q4V9L6 283 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 HYIQ5T013 277 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 TRAF7Q6Q0C0 670 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 PADI6Q6TGC4 694 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 RPAINQ86UA6 219 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 MTRQ99707 1265 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 CCSER1Q9C0I3 900 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 DHX33Q9H6R0 707 aaKnown RBP16.92■□□□□ 0.3
COL16A1-211ENST00000479100 IL23AQ9NPF7 189 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 SPTBN5Q9NRC6 3674 aaKnown RBP16.92■□□□□ 0.3
COL16A1-211ENST00000479100 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
COL16A1-211ENST00000479100 IGKV6-21A0A0C4DH24 114 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 DNAJB2P25686 324 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 RFC2P35250 354 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 NLRP11P59045 1033 aaKnown RBP16.91■□□□□ 0.3
COL16A1-211ENST00000479100 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
COL16A1-211ENST00000479100 KIZQ2M2Z5 673 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 FAM26DQ5JW98 314 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 PSRC1Q6PGN9 363 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-211ENST00000479100 RHPN2Q8IUC4 686 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 RPUSD2Q8IZ73 545 aaKnown RBP16.91■□□□□ 0.3
COL16A1-211ENST00000479100 LINC01465Q8N7H1 131 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 PDILTQ8N807 584 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 TCP11Q8WWU5 503 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 NLRP7Q8WX94 980 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 MYLIPQ8WY64 445 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 HERVK_113Q902F9 699 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 CELF4Q9BZC1 486 aaKnown RBP16.91■□□□□ 0.3
COL16A1-211ENST00000479100 EVPLQ92817 2033 aa16.91■□□□□ 0.3
COL16A1-211ENST00000479100 GRXCR1A8MXD5 290 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
COL16A1-211ENST00000479100 NBNO60934 754 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 PARNO95453 639 aaKnown RBP16.9■□□□□ 0.3
COL16A1-211ENST00000479100 PLA2G4BP0C869 781 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 GHRP10912 638 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 MGAT3Q09327 533 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 MBTPS1Q14703 1052 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 GRIN2CQ14957 1233 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-211ENST00000479100 FAM102BQ5T8I3 360 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 SHC4Q6S5L8 630 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 PRPF31Q8WWY3 499 aaKnown RBP16.9■□□□□ 0.3
COL16A1-211ENST00000479100 PSPC1Q8WXF1 523 aaKnown RBP16.9■□□□□ 0.3
COL16A1-211ENST00000479100 PBX4Q9BYU1 374 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 XPNPEP1Q9NQW7 623 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 FAM13BQ9NYF5 915 aa16.9■□□□□ 0.3
COL16A1-211ENST00000479100 CXXC1Q9P0U4 656 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-211ENST00000479100 CYP11B2P19099 503 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 PBX2P40425 430 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 STAT6P42226 847 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 MCM6Q14566 821 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 CCDC73Q6ZRK6 1079 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 KSR1Q8IVT5 923 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL16A1-211ENST00000479100 KCTD17Q8N5Z5 321 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 MCPH1Q8NEM0 835 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 TIFAQ96CG3 184 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 NLRP4Q96MN2 994 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 OSMRQ99650 979 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 OSBPL7Q9BZF2 842 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 POLR3FQ9H1D9 316 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-211ENST00000479100 POLD4Q9HCU8 107 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 GPRC5CQ9NQ84 441 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 COL4A3BPQ9Y5P4 624 aa16.89■□□□□ 0.29
COL16A1-211ENST00000479100 GPR32O75388 356 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 FGBP02675 491 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 SRGAP2CP0DJJ0 459 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 GPC3P51654 580 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 CRYBB1P53674 252 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-211ENST00000479100 RAD51AP2Q09MP3 1159 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 LAMTOR4Q0VGL1 99 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 LPIN1Q14693 890 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 GPNMBQ14956 572 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 LRRC15Q8TF66 581 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 RAD54LQ92698 747 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 RUSC1Q9BVN2 902 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 ZNF576Q9H609 170 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 BLOC1S4Q9NUP1 217 aa16.88■□□□□ 0.29
COL16A1-211ENST00000479100 ARID2Q68CP9 1835 aa16.87■□□□□ 0.29
COL16A1-211ENST00000479100 A0A087WZ62 844 aa16.87■□□□□ 0.29
COL16A1-211ENST00000479100 A0A087X0B3 334 aa16.87■□□□□ 0.29
COL16A1-211ENST00000479100 CXCL10P02778 98 aa16.87■□□□□ 0.29
COL16A1-211ENST00000479100 KRT18P05783 430 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms