RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SGSM2O43147 1006 aa19.51■□□□□ 0.71
VIM-204ENST00000478746 ALDH7A1P49419 539 aaKnown RBP19.51■□□□□ 0.71
VIM-204ENST00000478746 NAPAP54920 295 aa19.51■□□□□ 0.71
VIM-204ENST00000478746 NLRP11P59045 1033 aaKnown RBP19.51■□□□□ 0.71
VIM-204ENST00000478746 KANK3Q6NY19 840 aa19.51■□□□□ 0.71
VIM-204ENST00000478746 NIPA1Q7RTP0 329 aa19.51■□□□□ 0.71
VIM-204ENST00000478746 BBXQ8WY36 941 aaPredicted RBP19.51■□□□□ 0.71
VIM-204ENST00000478746 USTQ9Y2C2 406 aa19.51■□□□□ 0.71
VIM-204ENST00000478746 RBM8AQ9Y5S9 174 aaKnown RBP19.51■□□□□ 0.71
VIM-204ENST00000478746 DMDP11532 3685 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 NT5C1B-RDH14C9J2C7 533 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 METAP2P50579 478 aaKnown RBP eCLIP19.5■□□□□ 0.714e-13■■■□□ 16.2
VIM-204ENST00000478746 CLLU1OSQ5K130 101 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 WWC2Q6AWC2 1192 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 KIAA1841Q6NSI8 718 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 PLA2G4DQ86XP0 818 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 TEX2Q8IWB9 1127 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 CYP26B1Q9NR63 512 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 DZANK1Q9NVP4 752 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 AKT3Q9Y243 479 aa19.5■□□□□ 0.71
VIM-204ENST00000478746 MAFBQ9Y5Q3 323 aaPredicted RBP19.5■□□□□ 0.71
VIM-204ENST00000478746 DCHS1Q96JQ0 3298 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 MAGEB2O15479 319 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 DHX15O43143 795 aaKnown RBP19.49■□□□□ 0.71
VIM-204ENST00000478746 EOMESO95936 686 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 EIF4BP23588 611 aaKnown RBP19.49■□□□□ 0.71
VIM-204ENST00000478746 SREBF1P36956 1147 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 CLCN3P51790 818 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 ADCY7P51828 1080 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 BCAR1P56945 870 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 EFCAB12Q6NXP0 572 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 VPS52Q8N1B4 723 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 HELQQ8TDG4 1101 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 TMEM169Q96HH4 297 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 ADAMTS10Q9H324 1103 aa19.49■□□□□ 0.71
VIM-204ENST00000478746 MYH9P35579 1960 aaKnown RBP19.48■□□□□ 0.71
VIM-204ENST00000478746 A0A0U1RQF3 1178 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 SMCO2A6NFE2 343 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 IPO5O00410 1097 aaKnown RBP19.48■□□□□ 0.71
VIM-204ENST00000478746 PI15O43692 258 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 TMOD1P28289 359 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 TYW1BQ6NUM6 668 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 ZNF710Q8N1W2 664 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 ACSF2Q96CM8 615 aaPredicted RBP19.48■□□□□ 0.71
VIM-204ENST00000478746 MAP7D2Q96T17 732 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 CEP131Q9UPN4 1083 aa19.48■□□□□ 0.71
VIM-204ENST00000478746 GVINP1Q7Z2Y8 2422 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.47■□□□□ 0.71
VIM-204ENST00000478746 FAM86B1E9PN63 330 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 FAM86B2P0C5J1 330 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 EPCAMP16422 314 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 AOC1P19801 751 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 AP3B2Q13367 1082 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 GIT2Q14161 759 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 CWF19L1Q69YN2 538 aaKnown RBP19.47■□□□□ 0.71
VIM-204ENST00000478746 PPP1R18Q6NYC8 613 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 SYNE3Q6ZMZ3 975 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 MICU3Q86XE3 530 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 AUTS2Q8WXX7 1259 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 MRPL9Q9BYD2 267 aaKnown RBP19.47■□□□□ 0.71
VIM-204ENST00000478746 GLT8D2Q9H1C3 349 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 TBC1D22BQ9NU19 505 aa19.47■□□□□ 0.71
VIM-204ENST00000478746 PSAPP07602 524 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 NPR3P17342 541 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 TDGQ13569 410 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
VIM-204ENST00000478746 ANGPT1Q15389 498 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 ZNF746Q6NUN9 644 aaPredicted RBP19.46■□□□□ 0.71
VIM-204ENST00000478746 TMC5Q6UXY8 1006 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 ZNF598Q86UK7 904 aaKnown RBP19.46■□□□□ 0.71
VIM-204ENST00000478746 CABP7Q86V35 215 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 SLC22A17Q8WUG5 538 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 ZNF668Q96K58 619 aaPredicted RBP19.46■□□□□ 0.71
VIM-204ENST00000478746 RTP3Q9BQQ7 232 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 ZNF577Q9BSK1 485 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 LRRC2Q9BYS8 371 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 ZBP1Q9H171 429 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 IRAK3Q9Y616 596 aa19.46■□□□□ 0.71
VIM-204ENST00000478746 V9GY48 417 aaPredicted RBP19.46■□□□□ 0.71
VIM-204ENST00000478746 CTSAP10619 480 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 CLK2P49760 499 aaKnown RBP19.45■□□□□ 0.7
VIM-204ENST00000478746 POLGP54098 1239 aaPredicted RBP19.45■□□□□ 0.7
VIM-204ENST00000478746 OTOP3Q7RTS5 596 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 CCDC105Q8IYK2 499 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 LRRC71Q8N4P6 559 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 DTWD2Q8NBA8 298 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 SCLT1Q96NL6 688 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 DACT1Q9NYF0 836 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 GABBR1Q9UBS5 961 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 TCEAL9Q9UHQ7 104 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 FBXL21Q9UKT6 434 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 PCDHA10Q9Y5I2 948 aa19.45■□□□□ 0.7
VIM-204ENST00000478746 IGLV3-22A0A075B6J6 115 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 ZC3H11AO75152 810 aaKnown RBP eCLIP19.44■□□□□ 0.7
VIM-204ENST00000478746 DARSP14868 501 aaKnown RBP19.44■□□□□ 0.7
VIM-204ENST00000478746 FGFR4P22455 802 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 JAKMIP3Q5VZ66 844 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 DDX53Q86TM3 631 aaKnown RBP19.44■□□□□ 0.7
VIM-204ENST00000478746 SGMS1Q86VZ5 419 aa19.44■□□□□ 0.7
VIM-204ENST00000478746 PPFIBP1Q86W92 1011 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms