RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 GJA10Q969M2 543 aa17.78■□□□□ 0.44
GARNL3-215ENST00000478702 UNC45AQ9H3U1 944 aa17.78■□□□□ 0.44
GARNL3-215ENST00000478702 PCDHA2Q9Y5H9 948 aa17.78■□□□□ 0.44
GARNL3-215ENST00000478702 PCDHA10Q9Y5I2 948 aa17.78■□□□□ 0.44
GARNL3-215ENST00000478702 MAFBQ9Y5Q3 323 aaPredicted RBP17.78■□□□□ 0.44
GARNL3-215ENST00000478702 HBP1O60381 514 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 ATP4AP20648 1035 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 SFNP31947 248 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 COASYQ13057 564 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 TRIM29Q14134 588 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 PPP4R3AQ6IN85 833 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 B3GNT9Q6UX72 402 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 DIS3L2Q8IYB7 885 aaKnown RBP17.77■□□□□ 0.44
GARNL3-215ENST00000478702 MFSD14AQ96MC6 490 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 PHOX2BQ99453 314 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 NAP1L4Q99733 375 aaKnown RBP17.77■□□□□ 0.44
GARNL3-215ENST00000478702 CELF4Q9BZC1 486 aaKnown RBP17.77■□□□□ 0.44
GARNL3-215ENST00000478702 KCNMB3Q9NPA1 279 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.44
GARNL3-215ENST00000478702 BARX2Q9UMQ3 279 aaPredicted RBP17.77■□□□□ 0.44
GARNL3-215ENST00000478702 KDM3AQ9Y4C1 1321 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 ZBTB42B2RXF5 422 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 LOC730098B7Z3J9 87 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 CHMP2AO43633 222 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 ST18O60284 1047 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 STAG3L1P0CL83 205 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 NRIP1P48552 1158 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 HMGN5P82970 282 aaKnown RBP17.76■□□□□ 0.43
GARNL3-215ENST00000478702 PAK2Q13177 524 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 TMEM266Q2M3C6 531 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 BMP8AQ7Z5Y6 402 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 RBM23Q86U06 439 aaKnown RBP17.76■□□□□ 0.43
GARNL3-215ENST00000478702 PRSS33Q8NF86 280 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 RDM1Q8NG50 284 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 BBXQ8WY36 941 aaPredicted RBP17.76■□□□□ 0.43
GARNL3-215ENST00000478702 FAM167AQ96KS9 214 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 DISC1Q9NRI5 854 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 SAMM50Q9Y512 469 aa17.76■□□□□ 0.43
GARNL3-215ENST00000478702 MGEA5O60502 916 aa17.75■□□□□ 0.43
GARNL3-215ENST00000478702 RBM10P98175 930 aaKnown RBP17.75■□□□□ 0.43
GARNL3-215ENST00000478702 CBX2Q14781 532 aaPredicted RBP17.75■□□□□ 0.43
GARNL3-215ENST00000478702 UGCGQ16739 394 aa17.75■□□□□ 0.43
GARNL3-215ENST00000478702 ZNF484Q5JVG2 852 aa17.75■□□□□ 0.43
GARNL3-215ENST00000478702 IER5LQ5T953 404 aa17.75■□□□□ 0.43
GARNL3-215ENST00000478702 MTHFD1LQ6UB35 978 aa17.75■□□□□ 0.43
GARNL3-215ENST00000478702 PPP2R3CQ969Q6 453 aa17.75■□□□□ 0.43
GARNL3-215ENST00000478702 USP34Q70CQ2 3546 aa17.75■□□□□ 0.43
GARNL3-215ENST00000478702 SMIM35A0A1B0GVV1 85 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 BTBD18B2RXH4 712 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 M0QZ92 97 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 TBX3O15119 743 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 ZNF862O60290 1169 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 CCNT1O60563 726 aaKnown RBP17.74■□□□□ 0.43
GARNL3-215ENST00000478702 SARSP49591 514 aaKnown RBP17.74■□□□□ 0.43
GARNL3-215ENST00000478702 PRKCEQ02156 737 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 TRIM67Q6ZTA4 783 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 MIER3Q7Z3K6 550 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 CKAP2LQ8IYA6 745 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 VN1R2Q8NFZ6 395 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 TMEM40Q8WWA1 233 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 C8orf76Q96K31 380 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 FAM20AQ96MK3 541 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 CDHR5Q9HBB8 845 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 ERVK-5Q9HDB9 667 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 HCSTQ9UBK5 93 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 VAV3Q9UKW4 847 aa17.74■□□□□ 0.43
GARNL3-215ENST00000478702 USP15Q9Y4E8 981 aaPredicted RBP17.74■□□□□ 0.43
GARNL3-215ENST00000478702 TMEM221A6NGB7 291 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 M0R296 226 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
GARNL3-215ENST00000478702 C22orf31O95567 290 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 OATP04181 439 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 ZXDAP98168 799 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 NFX1Q12986 1120 aaKnown RBP17.73■□□□□ 0.43
GARNL3-215ENST00000478702 PPP2R5CQ13362 524 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 NME8Q8N427 588 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 LRFN2Q9ULH4 789 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 NOC2LQ9Y3T9 749 aaKnown RBP17.73■□□□□ 0.43
GARNL3-215ENST00000478702 PLXNA3P51805 1871 aa17.73■□□□□ 0.43
GARNL3-215ENST00000478702 PER2O15055 1255 aa17.72■□□□□ 0.43
GARNL3-215ENST00000478702 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
GARNL3-215ENST00000478702 KLRC1P26715 233 aa17.72■□□□□ 0.43
GARNL3-215ENST00000478702 GUCY1B3Q02153 619 aa17.72■□□□□ 0.43
GARNL3-215ENST00000478702 FAM102BQ5T8I3 360 aa17.72■□□□□ 0.43
GARNL3-215ENST00000478702 HAS1Q92839 578 aa17.72■□□□□ 0.43
GARNL3-215ENST00000478702 CEP131Q9UPN4 1083 aa17.72■□□□□ 0.43
GARNL3-215ENST00000478702 WNT7AO00755 349 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 ERVFC1P60507 584 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
GARNL3-215ENST00000478702 KIAA0319LQ8IZA0 1049 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 FAM184AQ8NB25 1140 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 FBXO18Q8NFZ0 1043 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 SUSD6Q92537 303 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 PBXIP1Q96AQ6 731 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 PHF7Q9BWX1 381 aaPredicted RBP17.71■□□□□ 0.43
GARNL3-215ENST00000478702 TLE6Q9H808 572 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 RGS18Q9NS28 235 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 GINS2Q9Y248 185 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms