RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 EYA4O95677 639 aa29.82■■■□□ 2.36
CCM2-211ENST00000478582 CALML4Q96GE6 196 aa29.82■■■□□ 2.36
CCM2-211ENST00000478582 SLC9A7Q96T83 725 aa29.82■■■□□ 2.36
CCM2-211ENST00000478582 CELF4Q9BZC1 486 aaKnown RBP29.82■■■□□ 2.36
CCM2-211ENST00000478582 TRPV2Q9Y5S1 764 aa29.82■■■□□ 2.36
CCM2-211ENST00000478582 GBF1Q92538 1859 aa29.82■■■□□ 2.36
CCM2-211ENST00000478582 M0QZ92 97 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 CUTAO60888 179 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 CDC42EP1Q00587 391 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 EMC2Q15006 297 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 EPSTI1Q96J88 318 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 CDK5RAP3Q96JB5 506 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 PCDHA11Q9Y5I1 949 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 SQORQ9Y6N5 450 aa29.81■■■□□ 2.36
CCM2-211ENST00000478582 ARID2Q68CP9 1835 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 E9PMD0 336 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 GPR32O75388 356 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 RABGGTBP53611 331 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 DRP2Q13474 957 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 SPECC1Q5M775 1068 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 AXDND1Q5T1B0 1012 aaPredicted RBP29.8■■■□□ 2.36
CCM2-211ENST00000478582 USP49Q70CQ1 688 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 KCNK18Q7Z418 384 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 TCP11Q8WWU5 503 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 SYMPKQ92797 1274 aaKnown RBP29.8■■■□□ 2.36
CCM2-211ENST00000478582 MTRQ99707 1265 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 BHMT2Q9H2M3 363 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 ATP6V0A4Q9HBG4 840 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 XPNPEP1Q9NQW7 623 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 AKT3Q9Y243 479 aa29.8■■■□□ 2.36
CCM2-211ENST00000478582 YBX2Q9Y2T7 364 aaKnown RBP29.8■■■□□ 2.36
CCM2-211ENST00000478582 ARHGEF35A5YM69 484 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 VTNP04004 478 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 TMEM62Q0P6H9 643 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 GRIN2CQ14957 1233 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 ZRSR1Q15695 479 aaKnown RBP29.79■■■□□ 2.36
CCM2-211ENST00000478582 LEO1Q8WVC0 666 aaPredicted RBP29.79■■■□□ 2.36
CCM2-211ENST00000478582 MYLIPQ8WY64 445 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 CHAMP1Q96JM3 812 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 SCAND2PQ9GZW5 306 aaPredicted RBP29.79■■■□□ 2.36
CCM2-211ENST00000478582 NKX2-4Q9H2Z4 354 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 SUCLA2Q9P2R7 463 aaPredicted RBP29.79■■■□□ 2.36
CCM2-211ENST00000478582 PCDHA7Q9UN72 937 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 EVPLQ92817 2033 aa29.79■■■□□ 2.36
CCM2-211ENST00000478582 ABHD14A-ACY1A0A1B0GW23 586 aa29.78■■■□□ 2.36
CCM2-211ENST00000478582 KCNJ6P48051 423 aa29.78■■■□□ 2.36
CCM2-211ENST00000478582 PADI6Q6TGC4 694 aa29.78■■■□□ 2.36
CCM2-211ENST00000478582 USP38Q8NB14 1042 aa29.78■■■□□ 2.36
CCM2-211ENST00000478582 ADAMTS10Q9H324 1103 aa29.78■■■□□ 2.36
CCM2-211ENST00000478582 SLC28A3Q9HAS3 691 aa29.78■■■□□ 2.36
CCM2-211ENST00000478582 CYP11B2P19099 503 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 NCLP19338 710 aaKnown RBP29.77■■■□□ 2.36
CCM2-211ENST00000478582 TXLNAP40222 546 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 ME1P48163 572 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 GPC3P51654 580 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 CRYBB1P53674 252 aaPredicted RBP29.77■■■□□ 2.36
CCM2-211ENST00000478582 IKBKEQ14164 716 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 KARSQ15046 597 aaKnown RBP29.77■■■□□ 2.36
CCM2-211ENST00000478582 TCTN1Q2MV58 587 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 FBXO47Q5MNV8 452 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 MCPH1Q8NEM0 835 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 TMEM143Q96AN5 459 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 SPATA32Q96LK8 384 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 IPO9Q96P70 1041 aaKnown RBP29.77■■■□□ 2.36
CCM2-211ENST00000478582 PLIN2Q99541 437 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 OSBPL7Q9BZF2 842 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 CHMP5Q9NZZ3 219 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 CCDC39Q9UFE4 941 aa29.77■■■□□ 2.36
CCM2-211ENST00000478582 ASAP2O43150 1006 aa29.76■■■□□ 2.35
CCM2-211ENST00000478582 USO1O60763 962 aaKnown RBP29.76■■■□□ 2.35
CCM2-211ENST00000478582 EFCAB14O75071 495 aa29.76■■■□□ 2.35
CCM2-211ENST00000478582 NLRP11P59045 1033 aaKnown RBP29.76■■■□□ 2.35
CCM2-211ENST00000478582 WDR5P61964 334 aaKnown RBP29.76■■■□□ 2.35
CCM2-211ENST00000478582 LPIN1Q14693 890 aa29.76■■■□□ 2.35
CCM2-211ENST00000478582 PLEKHG4Q58EX7 1191 aa29.76■■■□□ 2.35
CCM2-211ENST00000478582 HERC6Q8IVU3 1022 aa29.76■■■□□ 2.35
CCM2-211ENST00000478582 PSPC1Q8WXF1 523 aaKnown RBP29.76■■■□□ 2.35
CCM2-211ENST00000478582 CDHR5Q9HBB8 845 aa29.76■■■□□ 2.35
CCM2-211ENST00000478582 MYOGP15173 224 aa29.75■■■□□ 2.35
CCM2-211ENST00000478582 PLCG1P19174 1290 aa29.75■■■□□ 2.35
CCM2-211ENST00000478582 ARL2P36404 184 aa29.75■■■□□ 2.35
CCM2-211ENST00000478582 KIZQ2M2Z5 673 aa29.75■■■□□ 2.35
CCM2-211ENST00000478582 SYT2Q8N9I0 419 aaPredicted RBP29.75■■■□□ 2.35
CCM2-211ENST00000478582 DBF4BQ8NFT6 615 aa29.75■■■□□ 2.35
CCM2-211ENST00000478582 PRPF31Q8WWY3 499 aaKnown RBP29.75■■■□□ 2.35
CCM2-211ENST00000478582 BMP2KQ9NSY1 1161 aaPredicted RBP29.75■■■□□ 2.35
CCM2-211ENST00000478582 BLOC1S4Q9NUP1 217 aa29.75■■■□□ 2.35
CCM2-211ENST00000478582 COL6A3P12111 3177 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 SHC4Q6S5L8 630 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 TSHZ1Q6ZSZ6 1077 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 FAM43BQ6ZT52 329 aaPredicted RBP29.74■■■□□ 2.35
CCM2-211ENST00000478582 ZNF410Q86VK4 478 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 RHPN2Q8IUC4 686 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 RASSF8Q8NHQ8 419 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 LRRC15Q8TF66 581 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 COL4A3BPQ9Y5P4 624 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 LOXHD1Q8IVV2 1947 aa29.74■■■□□ 2.35
CCM2-211ENST00000478582 SIP14410 1827 aa29.73■■■□□ 2.35
CCM2-211ENST00000478582 PLA2G4BP0C869 781 aa29.73■■■□□ 2.35
CCM2-211ENST00000478582 GHRP10912 638 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms