RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 LGI4Q8N135 537 aa5.48□□□□□ -1.53
CCNL1-220ENST00000478454 ATL2Q8NHH9 583 aa5.48□□□□□ -1.53
CCNL1-220ENST00000478454 SOX7Q9BT81 388 aa5.48□□□□□ -1.53
CCNL1-220ENST00000478454 PCDH12Q9NPG4 1184 aa5.48□□□□□ -1.53
CCNL1-220ENST00000478454 KCMF1Q9P0J7 381 aa5.48□□□□□ -1.53
CCNL1-220ENST00000478454 USP36Q9P275 1121 aaKnown RBP5.48□□□□□ -1.53
CCNL1-220ENST00000478454 DENND2AQ9ULE3 1009 aa5.48□□□□□ -1.53
CCNL1-220ENST00000478454 NOC2LQ9Y3T9 749 aaKnown RBP5.48□□□□□ -1.53
CCNL1-220ENST00000478454 A0A0A6YYJ9 748 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 ANKRD62A6NC57 917 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 OPHN1O60890 802 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 PCDH8O95206 1070 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 CNOT4O95628 575 aaKnown RBP5.47□□□□□ -1.53
CCNL1-220ENST00000478454 PFKMP08237 780 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 MRE11P49959 708 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 BCAR1P56945 870 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 SESN3P58005 492 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 ACAP1Q15027 740 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 RNF151Q2KHN1 245 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 TBC1D10BQ4KMP7 808 aaPredicted RBP5.47□□□□□ -1.53
CCNL1-220ENST00000478454 ESPNLQ6ZVH7 1005 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 RALYLQ86SE5 291 aaKnown RBP5.47□□□□□ -1.53
CCNL1-220ENST00000478454 NKD2Q969F2 451 aaPredicted RBP5.47□□□□□ -1.53
CCNL1-220ENST00000478454 RTEL1Q9NZ71 1219 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 COL4A3BPQ9Y5P4 624 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 MYPNQ86TC9 1320 aa5.47□□□□□ -1.53
CCNL1-220ENST00000478454 MATN2O00339 956 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 ULK1O75385 1050 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 CDK11BP21127 795 aaKnown RBP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 ERVK-21P61565 698 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 PPP2CBP62714 309 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 PPP2CAP67775 309 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 ADAM15Q13444 863 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 TRIM25Q14258 630 aaKnown RBP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 DGKDQ16760 1214 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 CT83Q5H943 113 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 PITRM1Q5JRX3 1037 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 UBXN11Q5T124 520 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 RNF219Q5W0B1 726 aaPredicted RBP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 IQSEC1Q6DN90 963 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 BORAQ6PGQ7 559 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 BMP8AQ7Z5Y6 402 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 SPATS2Q86XZ4 545 aaKnown RBP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 SLC41A1Q8IVJ1 513 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 CFHR4Q92496 578 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 DYDC2Q96IM9 177 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 TEPSINQ96N21 525 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 FDXACB1Q9BRP7 624 aaPredicted RBP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 SSBP3Q9BWW4 388 aaPredicted RBP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.46□□□□□ -1.54
CCNL1-220ENST00000478454 PPP4R1LQ9P1A2 415 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 DNAI1Q9UI46 699 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 SLC4A7Q9Y6M7 1214 aa5.46□□□□□ -1.54
CCNL1-220ENST00000478454 C2orf78A6NCI8 922 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 RAB11FIP3O75154 756 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 LPLP06858 475 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 HNRNPLP14866 589 aaKnown RBP eCLIP5.45□□□□□ -1.54
CCNL1-220ENST00000478454 HGFACQ04756 655 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 MAP3K12Q12852 859 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 AGBL4Q5VU57 503 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 CCDC62Q6P9F0 684 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 IFNL2Q8IZJ0 200 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 TGFBRAP1Q8WUH2 860 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 LMBR1Q8WVP7 490 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 RPGRQ92834 1020 aaKnown RBP5.45□□□□□ -1.54
CCNL1-220ENST00000478454 RBM15Q96T37 977 aaKnown RBP eCLIP5.45□□□□□ -1.54
CCNL1-220ENST00000478454 NOL10Q9BSC4 688 aaKnown RBP5.45□□□□□ -1.54
CCNL1-220ENST00000478454 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 C14orf119Q9NWQ9 140 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 SLC5A4Q9NY91 659 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 SAE1Q9UBE0 346 aaPredicted RBP5.45□□□□□ -1.54
CCNL1-220ENST00000478454 MCM8Q9UJA3 840 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 EDARQ9UNE0 448 aa5.45□□□□□ -1.54
CCNL1-220ENST00000478454 CPEP16870 476 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 EPHB4P54760 987 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 SCAND1P57086 179 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 PTPROQ16827 1216 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 LIMS2Q7Z4I7 341 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 RPUSD2Q8IZ73 545 aaKnown RBP5.44□□□□□ -1.54
CCNL1-220ENST00000478454 RTKN2Q8IZC4 609 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 OR14K1Q8NGZ2 314 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 FERMT2Q96AC1 680 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 EAF2Q96CJ1 260 aaPredicted RBP5.44□□□□□ -1.54
CCNL1-220ENST00000478454 RAPGEFL1Q9UHV5 662 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 FAM184BQ9ULE4 1060 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 USP18Q9UMW8 372 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 CTDP1Q9Y5B0 961 aaPredicted RBP5.44□□□□□ -1.54
CCNL1-220ENST00000478454 NUMBLQ9Y6R0 609 aa5.44□□□□□ -1.54
CCNL1-220ENST00000478454 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 LAMTOR5O43504 91 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 PLATP00750 562 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 CANXP27824 592 aaKnown RBP5.43□□□□□ -1.54
CCNL1-220ENST00000478454 GPR3P46089 330 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 CTSWP56202 376 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 NFYCQ13952 458 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 FAM50AQ14320 339 aaKnown RBP5.43□□□□□ -1.54
CCNL1-220ENST00000478454 NFIXQ14938 502 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 ZMAT1Q5H9K5 638 aa5.43□□□□□ -1.54
CCNL1-220ENST00000478454 USP30Q70CQ3 517 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms