RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 C21orf62-AS1Q17RA5 79 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 FAM26FQ5R3K3 315 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 C20orf173Q96LM9 149 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 CAMKK2Q96RR4 588 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 L2HGDHQ9H9P8 463 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 SLC39A2Q9NP94 309 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 INTS7Q9NVH2 962 aaKnown RBP6.58□□□□□ -1.36
VPS50-214ENST00000477935 MAGEC2Q9UBF1 373 aaPredicted RBP6.58□□□□□ -1.36
VPS50-214ENST00000477935 ADGRB3O60242 1522 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 DUOX2Q9NRD8 1548 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 MYOM2P54296 1465 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 C1orf167Q5SNV9 1468 aa6.58□□□□□ -1.36
VPS50-214ENST00000477935 SLIT2O94813 1529 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 EHBP1L1Q8N3D4 1523 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 NOBOXO60393 691 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 FBXO21O94952 628 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 JMJD7P0C870 316 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 COL6A1P12109 1028 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 AOAHP28039 575 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 GLRBP48167 497 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 HERVK_113P62684 666 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 IRF9Q00978 393 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 SMAD2Q15796 467 aaKnown RBP6.57□□□□□ -1.36
VPS50-214ENST00000477935 RGL3Q3MIN7 710 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 PIK3R6Q5UE93 754 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 TRMT10BQ6PF06 316 aaKnown RBP6.57□□□□□ -1.36
VPS50-214ENST00000477935 OTOP1Q7RTM1 612 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 STPG3Q8N7X2 389 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 TXNDC5Q8NBS9 432 aaKnown RBP6.57□□□□□ -1.36
VPS50-214ENST00000477935 NINJ1Q92982 152 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 ORAI2Q96SN7 254 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 FEZ1Q99689 392 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 KCNH7Q9NS40 1196 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 KCND1Q9NSA2 647 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 USP40Q9NVE5 1235 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 ARHGAP28Q9P2N2 729 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 B3GALT1Q9Y5Z6 326 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 ERBINQ96RT1 1412 aa6.57□□□□□ -1.36
VPS50-214ENST00000477935 LRPPRCP42704 1394 aaKnown RBP6.57□□□□□ -1.36
VPS50-214ENST00000477935 LMTK2Q8IWU2 1503 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 TRAF5O00463 557 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 ENPP3O14638 875 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 IL18BPO95998 194 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 FLT3P36888 993 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 PKN3Q6P5Z2 889 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 FRMD5Q7Z6J6 570 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 CHST14Q8NCH0 376 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 DLG3Q92796 817 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 YTHDC1Q96MU7 727 aaKnown RBP6.56□□□□□ -1.36
VPS50-214ENST00000477935 BOCQ9BWV1 1114 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 ADAM7Q9H2U9 754 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 BTBD7Q9P203 1132 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 ADGRL3Q9HAR2 1447 aa6.56□□□□□ -1.36
VPS50-214ENST00000477935 TRPM2O94759 1503 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 MROH6A6NGR9 719 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 C9orf118A6NHY6 69 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 HIP1RO75146 1068 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 CYP1A1P04798 512 aaPredicted RBP6.55□□□□□ -1.36
VPS50-214ENST00000477935 MMEP08473 750 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 ZBTB48P10074 688 aaPredicted RBP6.55□□□□□ -1.36
VPS50-214ENST00000477935 MC4RP32245 332 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 CTSWP56202 376 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 ARHGAP44Q17R89 818 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 UBE2R2Q712K3 238 aaPredicted RBP6.55□□□□□ -1.36
VPS50-214ENST00000477935 KIAA0907Q7Z7F0 614 aaPredicted RBP6.55□□□□□ -1.36
VPS50-214ENST00000477935 WNK4Q96J92 1243 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 TACO1Q9BSH4 297 aaKnown RBP6.55□□□□□ -1.36
VPS50-214ENST00000477935 RRP7BPQ9NSQ0 103 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 RTEL1Q9NZ71 1219 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 PTPRUQ92729 1446 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 GLI3P10071 1580 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 KIF15Q9NS87 1388 aa6.55□□□□□ -1.36
VPS50-214ENST00000477935 LAMC1P11047 1609 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 CEP152O94986 1710 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 TLDC2A0PJX2 215 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 FAM83GA6ND36 823 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 RASSF10A6NK89 507 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 KRT37O76014 449 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 KLHL18O94889 574 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 KNG1P01042 644 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 CHGBP05060 677 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 PTGS1P23219 599 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 SDHAP31040 664 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 TMEM132BQ14DG7 1078 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 CFAP100Q494V2 611 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
VPS50-214ENST00000477935 CDCA2Q69YH5 1023 aaPredicted RBP6.54□□□□□ -1.36
VPS50-214ENST00000477935 LILRA6Q6PI73 481 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 LRRTM3Q86VH5 581 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 NIM1KQ8IY84 436 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 LCORQ96JN0 433 aaPredicted RBP6.54□□□□□ -1.36
VPS50-214ENST00000477935 TEPSINQ96N21 525 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 TMEM168Q9H0V1 697 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 CABP5Q9NP86 173 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 INCENPQ9NQS7 918 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 FTSJ1Q9UET6 329 aa6.54□□□□□ -1.36
VPS50-214ENST00000477935 PLAAQ9Y263 795 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms