RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 GINS2Q9Y248 185 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 MYH7P12883 1935 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 CACNA1IQ9P0X4 2223 aa8.44□□□□□ -1.06
SPTLC1-205ENST00000477888 MYH7BA7E2Y1 1941 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 TRIM6-TRIM34B2RNG4 842 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 NT5C1B-RDH14C9J2C7 533 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 ANHXE9PGG2 379 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 LAMTOR5O43504 91 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 CA8P35219 290 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 ALDH7A1P49419 539 aaKnown RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 POLGP54098 1239 aaPredicted RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 SPEM2Q0P670 501 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 SLC35G1Q2M3R5 365 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 CCDC178Q5BJE1 867 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 CLLU1OSQ5K130 101 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 ODR4Q5SWX8 454 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 N4BP2L1Q5TBK1 243 aaPredicted RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 MTHFD1LQ6UB35 978 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 DDX53Q86TM3 631 aaKnown RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 FAM228AQ86W67 206 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 CMASQ8NFW8 434 aaPredicted RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 ESR2Q92731 530 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 TNPO1Q92973 898 aaKnown RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 MYADMQ96S97 322 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 BCO2Q9BYV7 579 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 RHOBTB2Q9BYZ6 727 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 DDX19BQ9UMR2 479 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 MTF2Q9Y483 593 aaPredicted RBP8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 TTC41PQ6P2S7 1318 aa8.43□□□□□ -1.06
SPTLC1-205ENST00000477888 KANSL1LA0AUZ9 987 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 PALM3A6NDB9 673 aaPredicted RBP8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 KLRF2D3W0D1 207 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 LILRB3O75022 631 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 ITGB5P18084 799 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 KLRC1P26715 233 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 GBP2P32456 591 aaPredicted RBP8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 METAP2P50579 478 aaKnown RBP eCLIP8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 CLCN4P51793 760 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 BCAR1P56945 870 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 PLPPR4Q7Z2D5 763 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 NLRX1Q86UT6 975 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 IQCA1Q86XH1 822 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 ECHDC2Q86YB7 292 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 ABI1Q8IZP0 508 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 ENAHQ8N8S7 591 aaPredicted RBP8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 GPRASP2Q96D09 838 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 TMEM169Q96HH4 297 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 SHDQ96IW2 340 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 KLHL5Q96PQ7 755 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 ZSCAN10Q96SZ4 725 aaPredicted RBP8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 OSBPL6Q9BZF3 934 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 DCTPP1Q9H773 170 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 HELLSQ9NRZ9 838 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 MAD2L2Q9UI95 211 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 GMEB2Q9UKD1 530 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 ZMYM6O95789 1325 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 NEDD4P46934 1319 aa8.42□□□□□ -1.06
SPTLC1-205ENST00000477888 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 FANCMQ8IYD8 2048 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 TM4SF5O14894 197 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 LRP3O75074 770 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 PAPLNO95428 1278 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 CNPP09543 421 aaKnown RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 LAMP2P13473 410 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 NT5C2P49902 561 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 CRYBB1P53674 252 aaPredicted RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 GPC5P78333 572 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 TRAF1Q13077 416 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 HTR4Q13639 388 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 TSSK4Q6SA08 328 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 CYP26C1Q6V0L0 522 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 ZNF598Q86UK7 904 aaKnown RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 HOMER1Q86YM7 354 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 KDF1Q8NAX2 398 aaPredicted RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 BCL7CQ8WUZ0 217 aaPredicted RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 DDX1Q92499 740 aaKnown RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 STAMQ92783 540 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 CLDN23Q96B33 292 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 IGSF21Q96ID5 467 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 CDHR1Q96JP9 859 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 PIGSQ96S52 555 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 RPP25Q9BUL9 199 aaKnown RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 VN1R3Q9BXE9 311 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 RNF41Q9H4P4 317 aaPredicted RBP8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 RIOX1Q9H6W3 641 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 ZSWIM5Q9P217 1185 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 ZMIZ1Q9ULJ6 1067 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 CEP295Q9C0D2 2601 aa8.41□□□□□ -1.06
SPTLC1-205ENST00000477888 PNMA6FA0A0J9YX94 578 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 A0A0U1RQF3 1178 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 CCDC195A0A1B0GUA6 201 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 FAM170BA6NMN3 283 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 PIK3CDO00329 1044 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 MEIS2O14770 477 aa8.4□□□□□ -1.06
SPTLC1-205ENST00000477888 CYTH3O43739 400 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms