RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 CXorf38Q8TB03 319 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 STAG1Q8WVM7 1258 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 SLC5A5Q92911 643 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 TUBGCP5Q96RT8 1024 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 ADAM7Q9H2U9 754 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 METTL14Q9HCE5 456 aaKnown RBP6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 INVSQ9Y283 1065 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 ZDHHC9Q9Y397 364 aa6.27□□□□□ -1.41
SMNDC1-205ENST00000477763 HMGCRP04035 888 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 RGS3P49796 1198 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 BCAR1P56945 870 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 ITKQ08881 620 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 TERF2Q15554 542 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 BRDTQ58F21 947 aaPredicted RBP6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 ERICH6BQ5W0A0 696 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 TRIM68Q6AZZ1 485 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 OTOP2Q7RTS6 562 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 KANSL1Q7Z3B3 1105 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
SMNDC1-205ENST00000477763 MAFGO15525 162 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 KATNA1O75449 491 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 PLATP00750 562 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 ADCY8P40145 1251 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 EPHB4P54760 987 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 MYBPC3Q14896 1274 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 ZMAT1Q5H9K5 638 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 BROXQ5VW32 411 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 RASSF3Q86WH2 238 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 RTF1Q92541 710 aaKnown RBP6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 RPGRQ92834 1020 aaKnown RBP6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 MENTQ9BUN1 341 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 KCMF1Q9P0J7 381 aa6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 CNOT11Q9UKZ1 510 aaKnown RBP6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 NOC2LQ9Y3T9 749 aaKnown RBP6.25□□□□□ -1.41
SMNDC1-205ENST00000477763 LAMTOR5O43504 91 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 PRICKLE3O43900 615 aaPredicted RBP6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 S100BP04271 92 aaPredicted RBP6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 KCNQ1P51787 676 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 PPP2CBP62714 309 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 PPP2CAP67775 309 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 PLEKHG6Q3KR16 790 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 PRAMEF9Q5VWM5 478 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 KIAA1841Q6NSI8 718 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 ARHGEF18Q6ZSZ5 1173 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 BMP8AQ7Z5Y6 402 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 CNTD1Q8N815 330 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 RELTQ969Z4 430 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 AHCYL2Q96HN2 611 aaKnown RBP6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 PITHD1Q9GZP4 211 aaPredicted RBP6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 SEC61A2Q9H9S3 476 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 KCNG1Q9UIX4 513 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 VWA7Q9Y334 891 aa6.24□□□□□ -1.41
SMNDC1-205ENST00000477763 B4GALT4O60513 344 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 PRPF6O94906 941 aaKnown RBP6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 ZNF888P0CJ79 500 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 SESN2P58004 480 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 ADCY2Q08462 1091 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 MTMR1Q13613 665 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 NOLC1Q14978 699 aaKnown RBP eCLIP6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 DGKDQ16760 1214 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 ZNF568Q3ZCX4 644 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 TBC1D10BQ4KMP7 808 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 FRMD7Q6ZUT3 714 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 ESPNLQ6ZVH7 1005 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 GPR155Q7Z3F1 870 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 BCL6BQ8N143 479 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 CLRN3Q8NCR9 226 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 OR5AN1Q8NGI8 311 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 COG1Q8WTW3 980 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 MTMR8Q96EF0 704 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 MYL10Q9BUA6 226 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 HAPLN2Q9GZV7 340 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 POFUT1Q9H488 388 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 MSL2Q9HCI7 577 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 CDC42EP3Q9UKI2 254 aa6.23□□□□□ -1.41
SMNDC1-205ENST00000477763 PRKD3O94806 890 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 CNOT4O95628 575 aaKnown RBP6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 MEOX1P50221 254 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 NFYCQ13952 458 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 SYDE2Q5VT97 1194 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 AGBL4Q5VU57 503 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 SLFN13Q68D06 897 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 LARP4Q71RC2 724 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 ZNF496Q96IT1 587 aaPredicted RBP6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 WNT8AQ9H1J5 351 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 SAE1Q9UBE0 346 aaPredicted RBP6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 MSRAQ9UJ68 235 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 DENND2AQ9ULE3 1009 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 SPEF1Q9Y4P9 236 aa6.22□□□□□ -1.41
SMNDC1-205ENST00000477763 A0A0A6YYJ9 748 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 K7ESF4 209 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 FOXD2O60548 495 aaPredicted RBP6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 ITGB3P05106 788 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 MRE11P49959 708 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 PCOLCEQ15113 449 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 KLHDC10Q6PID8 442 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 RTKN2Q8IZC4 609 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 LPPQ93052 612 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 RBM15Q96T37 977 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 CCDC8Q9H0W5 538 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms