RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 EXOC6Q8TAG9 804 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 CDHR1Q96JP9 859 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 ADAM7Q9H2U9 754 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 AZI2Q9H6S1 392 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 ATP6V0A4Q9HBG4 840 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 TMEM161AQ9NX61 479 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 SORCS3Q9UPU3 1222 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 LZTS1Q9Y250 596 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 OTOGLQ3ZCN5 2332 aa11.15□□□□□ -0.62
COL4A5-204ENST00000477429 NBEAQ8NFP9 2946 aa11.15□□□□□ -0.63
COL4A5-204ENST00000477429 USP9XQ93008 2570 aaPredicted RBP11.15□□□□□ -0.63
COL4A5-204ENST00000477429 NFASCO94856 1347 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 ERICH2A1L162 156 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 FAM86B1E9PN63 330 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 MEIS1O00470 390 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 PRC1O43663 620 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 B4GALT3O60512 393 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 DDAH1O94760 285 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 FAM86B2P0C5J1 330 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 LAG3P18627 525 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 SMARCA1P28370 1054 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 CLCN3P51790 818 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 FUT2Q10981 343 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-204ENST00000477429 RALYLQ86SE5 291 aaKnown RBP11.14□□□□□ -0.63
COL4A5-204ENST00000477429 SLC39A11Q8N1S5 342 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 LINC01465Q8N7H1 131 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 CTCFLQ8NI51 663 aaPredicted RBP11.14□□□□□ -0.63
COL4A5-204ENST00000477429 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 VN1R3Q9BXE9 311 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 TMEM117Q9H0C3 514 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 ADAMTS10Q9H324 1103 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 C1orf112Q9NSG2 853 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 CEP295Q9C0D2 2601 aa11.14□□□□□ -0.63
COL4A5-204ENST00000477429 EVPLQ92817 2033 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 SPDYE3A6NKU9 549 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 MEIS3P2A8K0S8 358 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 MAFGO15525 162 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 SGSM2O43147 1006 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 CSDE1O75534 798 aaKnown RBP11.13□□□□□ -0.63
COL4A5-204ENST00000477429 CRYBB1P53674 252 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-204ENST00000477429 CEP55Q53EZ4 464 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 PDE12Q6L8Q7 609 aaKnown RBP11.13□□□□□ -0.63
COL4A5-204ENST00000477429 SWSAP1Q6NVH7 229 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 TMTC3Q6ZXV5 915 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 TMC7Q7Z402 723 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 HEATR3Q7Z4Q2 680 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
COL4A5-204ENST00000477429 ECHDC2Q86YB7 292 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 RNF169Q8NCN4 708 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 HELQQ8TDG4 1101 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 SLC22A17Q8WUG5 538 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
COL4A5-204ENST00000477429 RWDD1Q9H446 243 aaPredicted RBP11.13□□□□□ -0.63
COL4A5-204ENST00000477429 SEC63Q9UGP8 760 aaKnown RBP11.13□□□□□ -0.63
COL4A5-204ENST00000477429 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
COL4A5-204ENST00000477429 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 GPR182O15218 404 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 NARSO43776 548 aaKnown RBP11.12□□□□□ -0.63
COL4A5-204ENST00000477429 EDIL3O43854 480 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 HBP1O60381 514 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
COL4A5-204ENST00000477429 HOXB8P17481 243 aaPredicted RBP11.12□□□□□ -0.63
COL4A5-204ENST00000477429 METAP2P50579 478 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL4A5-204ENST00000477429 LONRF3Q496Y0 759 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 PDXDC2PQ6P474 469 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 UBALD2Q8IYN6 164 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 LRRC71Q8N4P6 559 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 FLCNQ8NFG4 579 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 CASP10Q92851 521 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 MAP4K1Q92918 833 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 SDF4Q9BRK5 362 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 ANO3Q9BYT9 981 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 ELAC1Q9H777 363 aaKnown RBP11.12□□□□□ -0.63
COL4A5-204ENST00000477429 NGRNQ9NPE2 291 aaKnown RBP11.12□□□□□ -0.63
COL4A5-204ENST00000477429 ZNF302Q9NR11 478 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 SPG21Q9NZD8 308 aa11.12□□□□□ -0.63
COL4A5-204ENST00000477429 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 STK25O00506 426 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 BACH1O14867 736 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 ZNF862O60290 1169 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 CXCL14O95715 111 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 RPLP2P05387 115 aaKnown RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 KIF5BP33176 963 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 CLK2P49760 499 aaKnown RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 DRP2Q13474 957 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 UGCGQ16739 394 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 RSPO4Q2I0M5 234 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 ZNF484Q5JVG2 852 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 TMC5Q6UXY8 1006 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 ZDHHC14Q8IZN3 488 aa11.11□□□□□ -0.63
COL4A5-204ENST00000477429 ST13P5Q8NFI4 369 aaPredicted RBP11.11□□□□□ -0.63
COL4A5-204ENST00000477429 CRYGNQ8WXF5 182 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms