RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 NPEPPSP55786 919 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 FAM189BP81408 668 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 EMC2Q15006 297 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 HYIQ5T013 277 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 PPP2R2DQ66LE6 453 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 PLA2G4FQ68DD2 849 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 TMEM40Q8WWA1 233 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 NLRP7Q8WX94 980 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 OSMRQ99650 979 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 MTRQ99707 1265 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 OSBPL7Q9BZF2 842 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 NT5C3AQ9H0P0 336 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 ATP6V0A4Q9HBG4 840 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 DACT1Q9NYF0 836 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 ST3GAL5Q9UNP4 418 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 MTMR6Q9Y217 621 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 YBX2Q9Y2T7 364 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 COL4A3BPQ9Y5P4 624 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 VPS37CA5D8V6 355 aaPredicted RBP13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 MED24O75448 989 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 SKIP12755 728 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 LONP1P36776 959 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 RESTQ13127 1097 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 TFDP1Q14186 410 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 DSC3Q14574 896 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 NBR1Q14596 966 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 TRMT1LQ7Z2T5 733 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 MYOCDQ8IZQ8 938 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 PRPF31Q8WWY3 499 aaKnown RBP13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 TIPINQ9BVW5 301 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 CDHR5Q9HBB8 845 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 KCNG1Q9UIX4 513 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 MICAL3Q7RTP6 2002 aa13.76□□□□□ -0.21
CLCNKA-205ENST00000477360 DENND3A2RUS2 1198 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 TMEM150BA6NC51 233 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 C9IYK1 514 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 HOXA2O43364 376 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 CA3P07451 260 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 ZSCAN20P17040 1043 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 CYP11B2P19099 503 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 ARL2P36404 184 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 RABGGTBP53611 331 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 ERVK-21P61565 698 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 TAP1Q03518 808 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 LAMTOR4Q0VGL1 99 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 NFX1Q12986 1120 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 DRP2Q13474 957 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 ATL3Q6DD88 541 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 FERMT3Q86UX7 667 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 RHPN2Q8IUC4 686 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 GUCD1Q96NT3 240 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 YME1L1Q96TA2 773 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 NKX2-4Q9H2Z4 354 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 XPNPEP1Q9NQW7 623 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 TMEM161AQ9NX61 479 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 LMCD1Q9NZU5 365 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 GINS2Q9Y248 185 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 LAMA2P24043 3122 aaKnown RBP13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 SIP14410 1827 aa13.75□□□□□ -0.21
CLCNKA-205ENST00000477360 TTC3P53804 2025 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 A0A087WZ62 844 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 CARNS1A5YM72 827 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 DGKIO75912 1065 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 EYA4O95677 639 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 EOMESO95936 686 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 SCP2P22307 547 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 AXLP30530 894 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 DDIT3P35638 169 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 PHKA2P46019 1235 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 IL17AQ16552 155 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 POTEGQ6S5H5 508 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 Q7L0L9 218 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 RTN4RL1Q86UN2 441 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 CMTR2Q8IYT2 770 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 PIGOQ8TEQ8 1089 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 LINC01599Q8WXQ3 324 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 CCDC51Q96ER9 411 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 SCLT1Q96NL6 688 aa13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 TGS1Q96RS0 853 aaKnown RBP13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
CLCNKA-205ENST00000477360 ADAM2Q99965 735 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms