RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MFSD2AQ8NA29 543 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 PPP1R35Q8TAP8 253 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 PPP1R13LQ8WUF5 828 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 COPS5Q92905 334 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 LTV1Q96GA3 475 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-215ENST00000476664 APOL5Q9BWW9 433 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 FOXQ1Q9C009 403 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 ATXN3LQ9H3M9 355 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 GPRC5BQ9NZH0 403 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 L1RE1Q9UN81 338 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 AFG3L2Q9Y4W6 797 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 PCDHA11Q9Y5I1 949 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 GPR45Q9Y5Y3 372 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 SZT2Q5T011 3432 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 DAPK1P53355 1430 aa8.03□□□□□ -1.12
LRCH3-215ENST00000476664 COL6A3P12111 3177 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 COL5A2P05997 1499 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-215ENST00000476664 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 ADARB2-AS1A8MUL3 147 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 TMPRSS2O15393 492 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 B3GALT2O43825 422 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 UBXN7O94888 489 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 CNOT4O95628 575 aaKnown RBP8.02□□□□□ -1.13
LRCH3-215ENST00000476664 THBDP07204 575 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 AGXTP21549 392 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 PRIM2P49643 509 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 TERF1P54274 439 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 SMAD3P84022 425 aaKnown RBP8.02□□□□□ -1.13
LRCH3-215ENST00000476664 SMAD2Q15796 467 aaKnown RBP8.02□□□□□ -1.13
LRCH3-215ENST00000476664 IZUMO3Q5VZ72 239 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 RINLQ6ZS11 566 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 SDR16C5Q8N3Y7 309 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 CISD2Q8N5K1 135 aaKnown RBP8.02□□□□□ -1.13
LRCH3-215ENST00000476664 NPLOC4Q8TAT6 608 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.13
LRCH3-215ENST00000476664 FBXL18Q96ME1 805 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 B3GNT5Q9BYG0 378 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 TOMM22Q9NS69 142 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 GPATCH2Q9NW75 528 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 CRIM1Q9NZV1 1036 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 PADI4Q9UM07 663 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 TRPM1Q7Z4N2 1603 aa8.02□□□□□ -1.13
LRCH3-215ENST00000476664 CAPN8A6NHC0 703 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 SOBPA7XYQ1 873 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 FAM47E-STBD1D6RA91 191 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 KDM1AO60341 852 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 MAN1A2O60476 641 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 PDCP20941 246 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 ABCB4P21439 1286 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 C5AR1P21730 350 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 TNFSF4P23510 183 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 CTBSQ01459 385 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 PRKG2Q13237 762 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 CRY1Q16526 586 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 ALDH1L2Q3SY69 923 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 IQCEQ6IPM2 695 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 RETSATQ6NUM9 610 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 CYP26C1Q6V0L0 522 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 ANKRD23Q86SG2 305 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 XAGE3Q8WTP9 111 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 FRS2Q8WU20 508 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
LRCH3-215ENST00000476664 LRTOMTQ8WZ04 291 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 ARL8AQ96BM9 186 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 MCOLN1Q9GZU1 580 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 DMRT3Q9NQL9 472 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 ZNF277Q9NRM2 450 aaPredicted RBP8.01□□□□□ -1.13
LRCH3-215ENST00000476664 SMC4Q9NTJ3 1288 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 CDC23Q9UJX2 597 aa8.01□□□□□ -1.13
LRCH3-215ENST00000476664 KNDC1Q76NI1 1749 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 ANKRD30BQ9BXX2 1392 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 A0A087WV62 115 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 A0A1W2PRQ8 180 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 RHPN2P1A8MT19 583 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 MAFKO60675 156 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 KRT37O76014 449 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 TBC1D8O95759 1140 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 ETV3P41162 512 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 PCBP4P57723 403 aaKnown RBP8□□□□□ -1.13
LRCH3-215ENST00000476664 NLRP12P59046 1061 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 KIF23Q02241 960 aaPredicted RBP8□□□□□ -1.13
LRCH3-215ENST00000476664 G3BP1Q13283 466 aaKnown RBP eCLIP8□□□□□ -1.13
LRCH3-215ENST00000476664 PGS1Q32NB8 556 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 UAP1L1Q3KQV9 507 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 ANO6Q4KMQ2 910 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 CCDC184Q52MB2 194 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 WDR45BQ5MNZ6 344 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 TSHZ3Q63HK5 1081 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 FAM180BQ6P0A1 224 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 PGBD2Q6P3X8 592 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 NPNTQ6UXI9 565 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 C4orf50Q6ZRC1 276 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 PDZD4Q76G19 769 aaPredicted RBP8□□□□□ -1.13
LRCH3-215ENST00000476664 COLGALT2Q8IYK4 626 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 SLC17A8Q8NDX2 589 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 TGFBRAP1Q8WUH2 860 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 RNF141Q8WVD5 230 aa8□□□□□ -1.13
LRCH3-215ENST00000476664 USP13Q92995 863 aaPredicted RBP8□□□□□ -1.13
LRCH3-215ENST00000476664 KLHDC7BQ96G42 594 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms