RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 KIF28PB7ZC32 967 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 FAM47E-STBD1D6RA91 191 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 H0Y3Z8 333 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 AP3B1O00203 1094 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 IGF2BP3O00425 579 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD55-208ENST00000476590 PSMD14O00487 310 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 HAT1O14929 419 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 STX10O60499 249 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 HSF2BPO75031 334 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ATP2C2O75185 946 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 PDE5AO76074 875 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 MYCP01106 439 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 IFIT2P09913 472 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 DDX5P17844 614 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 GNAZP19086 355 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 NR1D1P20393 614 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 SERPINB6P35237 376 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 TRAPPC10P48553 1259 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 MASP1P48740 699 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CACNA2D1P54289 1103 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 GJA9P57773 515 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 GUCY1A3Q02108 690 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 HSPA14Q0VDF9 509 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ITGB3BPQ13352 177 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 PCSK7Q16549 785 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 TMEM214Q6NUQ4 689 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 ERAP2Q6P179 960 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 RSBN1LQ6PCB5 846 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 KSR2Q6VAB6 950 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CCNI2Q6ZMN8 369 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 TBC1D1Q86TI0 1168 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 LONP2Q86WA8 852 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ZSCAN29Q8IWY8 852 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 RGL4Q8IZJ4 473 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 AOPEPQ8N6M6 819 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ARL6IP6Q8N6S5 226 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CCDC127Q96BQ5 260 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 IQCDQ96DY2 449 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 MED30Q96HR3 178 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 OLFM3Q96PB7 478 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 KLHL4Q9C0H6 718 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 GLT8D2Q9H1C3 349 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 VPS33BQ9H267 617 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 PLCB1Q9NQ66 1216 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 NDFIP2Q9NV92 336 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CNTN3Q9P232 1028 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 STIM2Q9P246 746 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CRNNQ9UBG3 495 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 MKL2Q9ULH7 1088 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 EXOC7Q9UPT5 735 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ZBTB1Q9Y2K1 713 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 SNX9Q9Y5X1 595 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 USH1CQ9Y6N9 552 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 NPHP4O75161 1426 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 CARMIL1Q5VZK9 1371 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 PLEKHG1Q9ULL1 1385 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 A0A1W2PQ67 120 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ESYT3A0FGR9 886 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 H0YC42 278 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 IDH3BO43837 385 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 STAMBPO95630 424 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 SCGB1D2O95969 90 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CHGBP05060 677 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 PRLRP16471 622 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 POU3F3P20264 500 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 CD9P21926 228 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ANXA13P27216 316 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CHKAP35790 457 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CCNFP41002 786 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 THOP1P52888 689 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 TPD52P55327 224 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 DSTNP60981 165 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 GUCY2DQ02846 1103 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 NNTQ13423 1086 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 HLTFQ14527 1009 aaKnown RBP eCLIP4.47□□□□□ -1.69
CD55-208ENST00000476590 TMEM95Q3KNT9 176 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 TKFCQ3LXA3 575 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 METTL21CQ5VZV1 264 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 TUBA3EQ6PEY2 450 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CCDC81Q6ZN84 652 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 HDGFL2Q7Z4V5 671 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 METTL3Q86U44 580 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 TMEM139Q8IV31 216 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 RHOT2Q8IXI1 618 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 VPS52Q8N1B4 723 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CRACR2BQ8N4Y2 399 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 CCDC89Q8N998 374 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 FAM133AQ8N9E0 248 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CFAP61Q8NHU2 1237 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 NPLOC4Q8TAT6 608 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 AENQ8WTP8 325 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 DNAJC9Q8WXX5 260 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 CDKL2Q92772 493 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ARL8AQ96BM9 186 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 FAM136AQ96C01 138 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 COG3Q96JB2 828 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 ERP44Q9BS26 406 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 EPB41L4AQ9HCS5 686 aaPredicted RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 TIMMDC1Q9NPL8 285 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms