RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-209ENST00000476241 SKIP12755 728 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 H2AFXP16104 143 aaPredicted RBP17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 ITPK1Q13572 414 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 BANK1Q8NDB2 785 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 SPATS2LQ9NUQ6 558 aaKnown RBP17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 TTLL3Q9Y4R7 772 aa17.33■□□□□ 0.36
HNRNPU-209ENST00000476241 SPARCL1Q14515 664 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 PDIA6Q15084 440 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 C12orf60Q5U649 245 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 ZNF233A6NK53 670 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 ANXA13P27216 316 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 RFFLQ8WZ73 363 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 CNOT8Q9UFF9 292 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 A6NJR5 290 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 GOLGA8SH3BPF8 625 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 DCTN3O75935 186 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 TDP2O95551 362 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 PTPAQ15257 358 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 SLC18A3Q16572 532 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 FRMD5Q7Z6J6 570 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 AGPAT5Q9NUQ2 364 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 ATP5HO75947 161 aa17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 DRAP1Q14919 205 aaPredicted RBP17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 NOC2LQ9Y3T9 749 aaKnown RBP17.32■□□□□ 0.36
HNRNPU-209ENST00000476241 DCCP43146 1447 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 PLEKHG2Q9H7P9 1386 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 PFASO15067 1338 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 RCN2Q14257 317 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 HVCN1Q96D96 273 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 CHMP6Q96FZ7 201 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 ANAPC7Q9UJX3 599 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 USP11P51784 963 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 BASP1P80723 227 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 GPSM2P81274 684 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 TFDP1Q14186 410 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 BEND6Q5SZJ8 279 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 PYROXD1Q8WU10 500 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 RIOK1Q9BRS2 568 aaKnown RBP17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 AP5Z1O43299 807 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 SMIM24O75264 130 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 SERPINB6P35237 376 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 SBK1Q52WX2 424 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 WDR70Q9NW82 654 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 FBXL5Q9UKA1 691 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 PACSIN2Q9UNF0 486 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 INO80Q9ULG1 1556 aaPredicted RBP17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 ZNF185O15231 689 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 RPS6KA2Q15349 733 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 DBN1Q16643 649 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 BBS9Q3SYG4 887 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 AP1ARQ63HQ0 302 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 HPSEQ9Y251 543 aa17.31■□□□□ 0.36
HNRNPU-209ENST00000476241 USP32Q8NFA0 1604 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 CAPN9O14815 690 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 MEFVO15553 781 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 MED7O43513 233 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 SORBS3O60504 671 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 DHX34Q14147 1143 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 NXNQ6DKJ4 435 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 COL23A1Q86Y22 540 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 PROCA1Q8NCQ7 364 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 NSUN4Q96CB9 384 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 ANKRD36BP1Q96IX9 119 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 VCX3AQ9NNX9 186 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 DNAJC17Q9NVM6 304 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 MUM1L1Q5H9M0 696 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 HPCAL4Q9UM19 191 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 GOLGA8IPA6NC78 632 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 GOLGA8JA6NMD2 632 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 USP17L10C9JJH3 530 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 CPP00450 1065 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 ZNF157P51786 506 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 PEX3P56589 373 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 STK4Q13043 487 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 NOA1Q8NC60 698 aaKnown RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 TJP3O95049 919 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 GH2P01242 217 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 ESRRAP11474 423 aaPredicted RBP17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 PRELPP51888 382 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 DRP2Q13474 957 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 RNF207Q6ZRF8 634 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 CALN1Q9BXU9 219 aa17.3■□□□□ 0.36
HNRNPU-209ENST00000476241 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 PDXKO00764 312 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 EIF3HO15372 352 aaKnown RBP eCLIP17.29■□□□□ 0.369e-9■■□□□ 12.4
HNRNPU-209ENST00000476241 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 GCLMP48507 274 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 ASPHQ12797 758 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 RBBP5Q15291 538 aaKnown RBP17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 HSP90AA5PQ58FG0 334 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 POTEGQ6S5H5 508 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 POTEEQ6S8J3 1075 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 CEP120Q8N960 986 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 RBM41Q96IZ5 413 aaKnown RBP17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 SENP2Q9HC62 589 aa17.29■□□□□ 0.36
HNRNPU-209ENST00000476241 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms