RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 RNF43Q68DV7 783 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 IRGCQ6NXR0 463 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 LONP2Q86WA8 852 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 SLF2Q8IX21 1173 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 SLC17A8Q8NDX2 589 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 TRIM31Q9BZY9 425 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 BRD8Q9H0E9 1235 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 SUCLA2Q9P2R7 463 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-205ENST00000475993 WDR37Q9Y2I8 494 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 SMIM23A6NLE4 172 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 IPO5O00410 1097 aaKnown RBP11.4□□□□□ -0.58
ABCF1-205ENST00000475993 DDAH1O94760 285 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 GCP02774 474 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 MGAT5Q09328 741 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 TSNAXIP1Q2TAA8 658 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 TAOK1Q7L7X3 1001 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 ATP11CQ8NB49 1132 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 TPCN2Q8NHX9 752 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 DNAJC9Q8WXX5 260 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 ERP44Q9BS26 406 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 ISCA1Q9BUE6 129 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 LRMDAQ9H2I8 198 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 PAIP2BQ9ULR5 123 aaKnown RBP11.4□□□□□ -0.58
ABCF1-205ENST00000475993 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
ABCF1-205ENST00000475993 SUPT3HO75486 399 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 GSTA2P09210 222 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 CALML3P27482 149 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 PTDSS1P48651 473 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 PTENP60484 403 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 TCERG1LQ5VWI1 586 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 MFSD5Q6N075 450 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 ZDHHC24Q6UX98 284 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 BICDL1Q6ZP65 573 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 CEP128Q6ZU80 1094 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 CABP7Q86V35 215 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 EXOC8Q8IYI6 725 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 BLIDQ8IZY5 108 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 GUF1Q8N442 669 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 SMYD1Q8NB12 490 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 UTP6Q9NYH9 597 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 LAD1O00515 517 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 DRG2P55039 364 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 AMPD3Q01432 767 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 AUHQ13825 339 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 BTG3Q14201 252 aaPredicted RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 CCDC152Q4G0S7 254 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 ZNF280DQ6N043 979 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 LDHAL6AQ6ZMR3 332 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 EPS8L3Q8TE67 593 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 SH3TC2Q8TF17 1288 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 TEKT1Q969V4 418 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 LSM14BQ9BX40 385 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 TANGO6Q9C0B7 1094 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 TXLNGQ9NUQ3 528 aa11.39□□□□□ -0.59
ABCF1-205ENST00000475993 BAZ2BQ9UIF8 2168 aaKnown RBP11.39□□□□□ -0.59
ABCF1-205ENST00000475993 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 AFPP02771 609 aaKnown RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 RXRBP28702 533 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 PSMC4P43686 418 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 SESN3P58005 492 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 USP46P62068 366 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 RAPGEF1Q13905 1077 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 PTPROQ16827 1216 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 FOXR2Q6PJQ5 311 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 PEX26Q7Z412 305 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 DAAM2Q86T65 1068 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 EXOC3L1Q86VI1 746 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 SESTD1Q86VW0 696 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 AGGF1Q8N302 714 aaeCLIP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 FAM133AQ8N9E0 248 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 RBBP8NLQ8NC74 664 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 FAM13CQ8NE31 585 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 AK8Q96MA6 479 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 NUDCD1Q96RS6 583 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ATP8A2Q9NTI2 1148 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 BARX2Q9UMQ3 279 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 NR2E1Q9Y466 385 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 DLEC1Q9Y238 1755 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 M0R2N6 131 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ZC3H6P61129 1189 aaKnown RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ARID5AQ03989 594 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 LRRC14Q15048 493 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ASIC2Q16515 512 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 UBAP2Q5T6F2 1119 aaKnown RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 IFNL2Q8IZJ0 200 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 SPATA5Q8NB90 893 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 CTNNBL1Q8WYA6 563 aaPredicted RBP11.38□□□□□ -0.59
ABCF1-205ENST00000475993 RAPGEF4Q8WZA2 1011 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 HES6Q96HZ4 224 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 DCAF5Q96JK2 942 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 UBAP1Q9NZ09 502 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ABCF2Q9UG63 623 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ALS2Q96Q42 1657 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 ATP8B3O60423 1300 aa11.38□□□□□ -0.59
ABCF1-205ENST00000475993 MROH7Q68CQ1 1323 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms