RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 STAT5BP51692 787 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 ACTR2P61160 394 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 SMAD4Q13485 552 aaKnown RBP11.92□□□□□ -0.5
CALD1-217ENST00000475772 NAALADL2Q58DX5 795 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 HERC4Q5GLZ8 1057 aaPredicted RBP11.92□□□□□ -0.5
CALD1-217ENST00000475772 IER5Q5VY09 327 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 CREB3L3Q68CJ9 461 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 MTHFD1LQ6UB35 978 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 NFXL1Q6ZNB6 911 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 SGMS1Q86VZ5 419 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 NPAS4Q8IUM7 802 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 CMTR2Q8IYT2 770 aaKnown RBP11.92□□□□□ -0.5
CALD1-217ENST00000475772 POF1BQ8WVV4 589 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 FTHL17Q9BXU8 183 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 JPH1Q9HDC5 661 aaPredicted RBP11.92□□□□□ -0.5
CALD1-217ENST00000475772 FAM50BQ9Y247 325 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 SMIM35A0A1B0GVV1 85 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 SPDYE3A6NKU9 549 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 MEIS1O00470 390 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 ADAMTS3O15072 1205 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 GLP2RO95838 553 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 CCNE2O96020 404 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 CALM1P0DP23 149 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 CALM2P0DP24 149 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 CALM3P0DP25 149 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 KLRC1P26715 233 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 EXOSC10Q01780 885 aaKnown RBP11.91□□□□□ -0.5
CALD1-217ENST00000475772 NHLH1Q02575 133 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 TMEM266Q2M3C6 531 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 PAN2Q504Q3 1202 aaKnown RBP11.91□□□□□ -0.5
CALD1-217ENST00000475772 ABHD15Q6UXT9 468 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 TMEM40Q8WWA1 233 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 AGO4Q9HCK5 861 aaKnown RBP11.91□□□□□ -0.5
CALD1-217ENST00000475772 ERVK-5Q9HDB9 667 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 TMEM260Q9NX78 707 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 CD207Q9UJ71 328 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
CALD1-217ENST00000475772 ZBTB42B2RXF5 422 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 STXBP3O00186 592 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 DHX15O43143 795 aaKnown RBP11.9□□□□□ -0.5
CALD1-217ENST00000475772 SCG2P13521 617 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.5
CALD1-217ENST00000475772 SKOR1P84550 965 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 RBM10P98175 930 aaKnown RBP11.9□□□□□ -0.5
CALD1-217ENST00000475772 COASYQ13057 564 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 CEP55Q53EZ4 464 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 FAM102BQ5T8I3 360 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 USP34Q70CQ2 3546 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 KIAA0319LQ8IZA0 1049 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 NME8Q8N427 588 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 EFHBQ8N7U6 833 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 ESYT1Q9BSJ8 1104 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 UPF3BQ9BZI7 483 aaKnown RBP11.9□□□□□ -0.5
CALD1-217ENST00000475772 AZI2Q9H6S1 392 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
CALD1-217ENST00000475772 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
CALD1-217ENST00000475772 LOC730098B7Z3J9 87 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 GDF9O60383 454 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 RPLP2P05387 115 aaKnown RBP11.89□□□□□ -0.51
CALD1-217ENST00000475772 STAG3L1P0CL83 205 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 NRIP1P48552 1158 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
CALD1-217ENST00000475772 MRE11P49959 708 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 ERVFC1P60507 584 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 KRT76Q01546 638 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 NFX1Q12986 1120 aaKnown RBP11.89□□□□□ -0.51
CALD1-217ENST00000475772 PAK2Q13177 524 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 CBX2Q14781 532 aaPredicted RBP11.89□□□□□ -0.51
CALD1-217ENST00000475772 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 RBM23Q86U06 439 aaKnown RBP11.89□□□□□ -0.51
CALD1-217ENST00000475772 MICU3Q86XE3 530 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 CCDC60Q8IWA6 550 aaPredicted RBP11.89□□□□□ -0.51
CALD1-217ENST00000475772 SMRP1Q8NCR6 262 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 VN1R2Q8NFZ6 395 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 CRYGNQ8WXF5 182 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 EDAQ92838 391 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 TCEANC2Q96MN5 208 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 ANO3Q9BYT9 981 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 KCNH6Q9H252 994 aa11.89□□□□□ -0.51
CALD1-217ENST00000475772 BARX2Q9UMQ3 279 aaPredicted RBP11.89□□□□□ -0.51
CALD1-217ENST00000475772 SMCO2A6NFE2 343 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 C9IYK1 514 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 FAM86B1E9PN63 330 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 PER2O15055 1255 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 EDIL3O43854 480 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 HBP1O60381 514 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 PPFIA3O75145 1194 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 FAM86B2P0C5J1 330 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 CDC27P30260 824 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 SREBF1P36956 1147 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 NDUFV1P49821 464 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 NAPAP54920 295 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 WNT7BP56706 349 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 FAM189BP81408 668 aa11.88□□□□□ -0.51
CALD1-217ENST00000475772 KCNC3Q14003 757 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms