RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 NSUN2Q08J23 767 aaKnown RBP eCLIP18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 SLFNL1Q499Z3 407 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 TMEM270Q6UE05 265 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 DCTN4Q9UJW0 460 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 L3MBTL1Q9Y468 752 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 KPNA7A9QM74 516 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 HAUS5O94927 633 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 KRT39Q6A163 491 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 IRAK4Q9NWZ3 460 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 SLC4A7Q9Y6M7 1214 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 GMNCA6NCL1 334 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 CLDN3O15551 220 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 CAV1Q03135 178 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 KLHL38Q2WGJ6 581 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 NBPF9Q3BBW0 867 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 CATSPER4Q7RTX7 472 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 OSBPL9Q96SU4 736 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 DDX47Q9H0S4 455 aaKnown RBP18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 RPAP1Q9BWH6 1393 aaPredicted RBP18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L5A8MUK1 530 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 CYP2D6P10635 497 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 JAK3P52333 1124 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 PFKFB3Q16875 520 aaPredicted RBP18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 TRPV6Q9H1D0 765 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 YY1AP1Q9H869 796 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 STOML1Q9UBI4 398 aa18.94■□□□□ 0.62
LPCAT1-202ENST00000475622 MCF2P10911 925 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 PPP2R2AP63151 447 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 FAM83BQ5T0W9 1011 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 RAD54LQ92698 747 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 GPR101Q96P66 508 aaPredicted RBP18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 POLD4Q9HCU8 107 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 ASNSD1Q9NWL6 643 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 TMEM179Q6ZVK1 233 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 SCG3Q8WXD2 468 aaKnown RBP18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 CPVLQ9H3G5 476 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 HNRNPCL2B2RXH8 293 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 HNRNPCL1O60812 293 aaKnown RBP18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 PPM1NQ8N819 430 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 OXER1Q8TDS5 423 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 ZNF341Q9BYN7 854 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 EDEM3Q9BZQ6 932 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 NEDD4P46934 1319 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 F8W8V4 182 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 GH2P01242 217 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 COPS2P61201 443 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 PADI6Q6TGC4 694 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 FMR1NBQ8N0W7 255 aaPredicted RBP18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 ING2Q9H160 280 aa18.93■□□□□ 0.62
LPCAT1-202ENST00000475622 CCDC195A0A1B0GUA6 201 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 BRAFP15056 766 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 FRA10AC1Q70Z53 315 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 KCNV2Q8TDN2 545 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 SH3RF3Q8TEJ3 882 aaPredicted RBP18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 LRRC37BQ96QE4 947 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 FAM96AQ9H5X1 160 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 ATP6V0A4Q9HBG4 840 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 BSDC1Q9NW68 430 aaPredicted RBP18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 HACD3Q9P035 362 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 SLC8A2Q9UPR5 921 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 COASYQ13057 564 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 DRP2Q13474 957 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 MORF4L2Q15014 288 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 PVALEFA0A1B0GWK0 134 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 ZBTB5O15062 677 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 CALB1P05937 261 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 NFX1Q12986 1120 aaKnown RBP18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 SUSD4Q5VX71 490 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 RGS9BPQ6ZS82 235 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 CCNYL1Q8N7R7 359 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 ZNF564Q8TBZ8 553 aaPredicted RBP18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 FSD1LQ9BXM9 530 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 PRR29P0C7W0 189 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 MTMR1Q13613 665 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 ZNF699Q32M78 642 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 CCDC144BQ3MJ40 725 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 SLC27A3Q5K4L6 730 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 RC3H1Q5TC82 1133 aaKnown RBP18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 PRPF38AQ8NAV1 312 aaKnown RBP18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 SNX2O60749 519 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 PDHA1P08559 390 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 PRELPP51888 382 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 GRAPQ13588 217 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 MCPH1Q8NEM0 835 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 GRAPLQ8TC17 118 aaPredicted RBP18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 TMEM47Q9BQJ4 181 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 BPIFA3Q9BQP9 254 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 FAM213AQ9BRX8 229 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 NUP85Q9BW27 656 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 HDAC6Q9UBN7 1215 aa18.92■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L15C9J2P7 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L13C9JLJ4 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L11C9JVI0 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L18D6R9N7 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L22D6RA61 530 aa18.91■□□□□ 0.62
LPCAT1-202ENST00000475622 USP17L17D6RBQ6 530 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms