RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SLC39A14Q15043 492 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 LETM2Q2VYF4 491 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 TJAP1Q5JTD0 557 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 LINC00301Q8NCQ3 95 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 GDPD5Q8WTR4 605 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 FAM20AQ96MK3 541 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 NIFKQ9BYG3 293 aaKnown RBP17.49■□□□□ 0.39
CPSF3-203ENST00000475482 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 VAV3Q9UKW4 847 aa17.49■□□□□ 0.39
CPSF3-203ENST00000475482 NOC2LQ9Y3T9 749 aaKnown RBP17.49■□□□□ 0.39
CPSF3-203ENST00000475482 XIRP2A4UGR9 3374 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 CHMP2AO43633 222 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 PPP6R2O75170 966 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 ME1P48163 572 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 CRYBB1P53674 252 aaPredicted RBP17.48■□□□□ 0.39
CPSF3-203ENST00000475482 PAK2Q13177 524 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 EPC2Q52LR7 807 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 PIK3AP1Q6ZUJ8 805 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 MIER3Q7Z3K6 550 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 ZNF710Q8N1W2 664 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 HAS1Q92839 578 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 CLP1Q92989 425 aaKnown RBP17.48■□□□□ 0.39
CPSF3-203ENST00000475482 MTUS1Q9ULD2 1270 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 CLIC4Q9Y696 253 aa17.48■□□□□ 0.39
CPSF3-203ENST00000475482 MORC2Q9Y6X9 1032 aaPredicted RBP17.48■□□□□ 0.39
CPSF3-203ENST00000475482 MUC3AQ02505 3323 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 C5orf67F2Z3F1 127 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 H3BNC9 293 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 EML1O00423 815 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
CPSF3-203ENST00000475482 XKR3Q5GH77 459 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 EFCAB12Q6NXP0 572 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 TRMT1LQ7Z2T5 733 aaKnown RBP17.47■□□□□ 0.39
CPSF3-203ENST00000475482 TMEM192Q8IY95 271 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 FBXO22Q8NEZ5 403 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 ASB2Q96Q27 587 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 NAP1L4Q99733 375 aaKnown RBP17.47■□□□□ 0.39
CPSF3-203ENST00000475482 ADAMTS10Q9H324 1103 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.47■□□□□ 0.39
CPSF3-203ENST00000475482 ADGRA3Q8IWK6 1321 aa17.47■□□□□ 0.39
CPSF3-203ENST00000475482 FNDC1Q4ZHG4 1894 aaPredicted RBP17.46■□□□□ 0.39
CPSF3-203ENST00000475482 IGKV6-21A0A0C4DH24 114 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 FAM205CA6NFA0 338 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 RPS6KA5O75582 802 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 VTNP04004 478 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 CLCN3P51790 818 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 MRPS5P82675 430 aaKnown RBP17.46■□□□□ 0.39
CPSF3-203ENST00000475482 SPIRE1Q08AE8 756 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 KIZQ2M2Z5 673 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 TMEM266Q2M3C6 531 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 TTC38Q5R3I4 469 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 ODR4Q5SWX8 454 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 NPAS4Q8IUM7 802 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 MICALL1Q8N3F8 863 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 METTL13Q8N6R0 699 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 SYMPKQ92797 1274 aaKnown RBP17.46■□□□□ 0.39
CPSF3-203ENST00000475482 ST3GAL5Q9UNP4 418 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 ATG2AQ2TAZ0 1938 aa17.46■□□□□ 0.39
CPSF3-203ENST00000475482 KIAA1671Q9BY89 1806 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 GPR182O15218 404 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 MGEA5O60502 916 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
CPSF3-203ENST00000475482 TMOD1P28289 359 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
CPSF3-203ENST00000475482 ADALQ6DHV7 355 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 FAM228AQ86W67 206 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 LRRC71Q8N4P6 559 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 OSMRQ99650 979 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 RGS18Q9NS28 235 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 GINS2Q9Y248 185 aa17.45■□□□□ 0.38
CPSF3-203ENST00000475482 A0A1W2PQ27 194 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 A0A1W2PQ64 194 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 A0A1W2PQD8 194 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 C9IYK1 514 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 GADD45BO75293 160 aaPredicted RBP17.44■□□□□ 0.38
CPSF3-203ENST00000475482 RB1P06400 928 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 ATP2B1P20020 1258 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 SARSP49591 514 aaKnown RBP17.44■□□□□ 0.38
CPSF3-203ENST00000475482 PSMC5P62195 406 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 FAM189BP81408 668 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 NFX1Q12986 1120 aaKnown RBP17.44■□□□□ 0.38
CPSF3-203ENST00000475482 DSC3Q14574 896 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 PTPAQ15257 358 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 ANO5Q75V66 913 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 CMTR2Q8IYT2 770 aaKnown RBP17.44■□□□□ 0.38
CPSF3-203ENST00000475482 GPT2Q8TD30 523 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 MRPL38Q96DV4 380 aaKnown RBP17.44■□□□□ 0.38
CPSF3-203ENST00000475482 COG5Q9UP83 839 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 RWDD3Q9Y3V2 267 aa17.44■□□□□ 0.38
CPSF3-203ENST00000475482 TCF20Q9UGU0 1960 aaKnown RBP17.43■□□□□ 0.38
CPSF3-203ENST00000475482 TMEM150BA6NC51 233 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 LAD1O00515 517 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 CUTAO60888 179 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 STAG3L1P0CL83 205 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 EIF4BP23588 611 aaKnown RBP17.43■□□□□ 0.38
CPSF3-203ENST00000475482 BMPR1AP36894 532 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 QARSP47897 775 aaKnown RBP17.43■□□□□ 0.38
CPSF3-203ENST00000475482 GPC3P51654 580 aa17.43■□□□□ 0.38
CPSF3-203ENST00000475482 NLRP11P59045 1033 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms