RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ATP8B4Q8TF62 1192 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 SPIRE2Q8WWL2 714 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 SLC7A3Q8WY07 619 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 HVCN1Q96D96 273 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 TUBGCP2Q9BSJ2 902 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 STRA6Q9BX79 667 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 POLR3FQ9H1D9 316 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-210ENST00000475329 DHX33Q9H6R0 707 aaKnown RBP15.12■□□□□ 0.01
TRAF4-210ENST00000475329 XPNPEP1Q9NQW7 623 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 GJD2Q9UKL4 321 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
TRAF4-210ENST00000475329 EVPLQ92817 2033 aa15.12■□□□□ 0.01
TRAF4-210ENST00000475329 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-210ENST00000475329 CETN3O15182 167 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 TEX33O43247 280 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 SMPD1P17405 629 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 NR2F2P24468 414 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 RPL13P26373 211 aaKnown RBP15.11■□□□□ 0.01
TRAF4-210ENST00000475329 MARK3P27448 753 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 TARBP2Q15633 366 aaKnown RBP15.11■□□□□ 0.01
TRAF4-210ENST00000475329 NFIL3Q16649 462 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 CCDC40Q4G0X9 1142 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 SPECC1LQ69YQ0 1117 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 HAUS6Q7Z4H7 955 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 ZSCAN30Q86W11 494 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 OR6J1Q8NGC5 347 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 GOLGA5Q8TBA6 731 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 EEF2KMTQ96G04 330 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 IFT74Q96LB3 600 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 ACCSQ96QU6 501 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 CEP89Q96ST8 783 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 TMEM206Q9H813 350 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 KMT5AQ9NQR1 393 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 FLRT1Q9NZU1 646 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 KCNG1Q9UIX4 513 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 ITIH6Q6UXX5 1313 aa15.11■□□□□ 0.01
TRAF4-210ENST00000475329 CCDC169A6NNP5 214 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 H0YCG3 227 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 PES1O00541 588 aaKnown RBP15.1■□□□□ 0.01
TRAF4-210ENST00000475329 SLC16A4O15374 487 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 NR3C1P04150 777 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 LGALS2P05162 132 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 ABCD1P33897 745 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 PBX1P40424 430 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 NPTX2P47972 431 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 DNM2P50570 870 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 MARSP56192 900 aaKnown RBP15.1■□□□□ 0.01
TRAF4-210ENST00000475329 LACTBP83111 547 aaPredicted RBP15.1■□□□□ 0.01
TRAF4-210ENST00000475329 GTF2BQ00403 316 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 TNFAIP2Q03169 654 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 UBXN1Q04323 297 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 KCNA1Q09470 495 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 ADAM9Q13443 819 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 PLCB4Q15147 1175 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 CCL14Q16627 93 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 MAN2A1Q16706 1144 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 EXOC8Q8IYI6 725 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 SYCP3Q8IZU3 236 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 AFG1LQ8WV93 481 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 BSNDQ8WZ55 320 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 NOC4LQ9BVI4 516 aaKnown RBP15.1■□□□□ 0.01
TRAF4-210ENST00000475329 GBP3Q9H0R5 595 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 ERAP1Q9NZ08 941 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 TRPC6Q9Y210 931 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 ZKSCAN5Q9Y2L8 839 aa15.1■□□□□ 0.01
TRAF4-210ENST00000475329 SLC16A3O15427 465 aaKnown RBP15.09■□□□□ 0.01
TRAF4-210ENST00000475329 TGFB1I1O43294 461 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 GAS2O43903 313 aaKnown RBP15.09■□□□□ 0.01
TRAF4-210ENST00000475329 HBP1O60381 514 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 MAFO75444 373 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-210ENST00000475329 SCP2P22307 547 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 CTGFP29279 349 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 PSMC4P43686 418 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 SOX10P56693 466 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 TBC1D8BQ0IIM8 1120 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 PPP2R5AQ15172 486 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 KSR1Q8IVT5 923 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 JPH2Q9BR39 696 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-210ENST00000475329 KCNF1Q9H3M0 494 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 CGNQ9P2M7 1197 aaKnown RBP15.09■□□□□ 0.01
TRAF4-210ENST00000475329 ZNF215Q9UL58 517 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-210ENST00000475329 EXOC7Q9UPT5 735 aa15.09■□□□□ 0.01
TRAF4-210ENST00000475329 A0A1W2PQC6 194 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 IGHA2P01877 340 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 MMP3P08254 477 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 ZNF865P0CJ78 1059 aaPredicted RBP15.08■□□□□ 0
TRAF4-210ENST00000475329 EPB41P11171 864 aaKnown RBP15.08■□□□□ 0
TRAF4-210ENST00000475329 XRCC5P13010 732 aaKnown RBP15.08■□□□□ 0
TRAF4-210ENST00000475329 HOXD8P13378 290 aaPredicted RBP15.08■□□□□ 0
TRAF4-210ENST00000475329 SFPQP23246 707 aaKnown RBP eCLIP15.08■□□□□ 0
TRAF4-210ENST00000475329 MSNP26038 577 aaKnown RBP15.08■□□□□ 0
TRAF4-210ENST00000475329 CYP2C19P33261 490 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 ARL2P36404 184 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 SNRPFP62306 86 aaKnown RBP15.08■□□□□ 0
TRAF4-210ENST00000475329 TBX2Q13207 712 aaPredicted RBP15.08■□□□□ 0
TRAF4-210ENST00000475329 TRIM14Q14142 442 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 KIF22Q14807 665 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 PTPN21Q16825 1174 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 VWA3BQ502W6 1294 aa15.08■□□□□ 0
TRAF4-210ENST00000475329 MIIPQ5JXC2 388 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms