RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 ODR4Q5SWX8 454 aa13.77□□□□□ -0.21
SSR1-205ENST00000475213 FAM43BQ6ZT52 329 aaPredicted RBP13.77□□□□□ -0.21
SSR1-205ENST00000475213 HAS1Q92839 578 aa13.77□□□□□ -0.21
SSR1-205ENST00000475213 HLA-CQ95604 372 aa13.77□□□□□ -0.21
SSR1-205ENST00000475213 RNF25Q96BH1 459 aaPredicted RBP13.77□□□□□ -0.21
SSR1-205ENST00000475213 MRPL38Q96DV4 380 aaKnown RBP13.77□□□□□ -0.21
SSR1-205ENST00000475213 CEP89Q96ST8 783 aa13.77□□□□□ -0.21
SSR1-205ENST00000475213 ADAM2Q99965 735 aa13.77□□□□□ -0.21
SSR1-205ENST00000475213 ADAMTS10Q9H324 1103 aa13.77□□□□□ -0.21
SSR1-205ENST00000475213 COG5Q9UP83 839 aa13.77□□□□□ -0.21
SSR1-205ENST00000475213 DENND3A2RUS2 1198 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 TBX3O15119 743 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 MMP1P03956 469 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 RB1P06400 928 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
SSR1-205ENST00000475213 BMPR1AP36894 532 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 GPC3P51654 580 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 FOSBP53539 338 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 PSMC5P62195 406 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 PTPROQ16827 1216 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 CMTR2Q8IYT2 770 aaKnown RBP13.76□□□□□ -0.21
SSR1-205ENST00000475213 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 ZNF668Q96K58 619 aaPredicted RBP13.76□□□□□ -0.21
SSR1-205ENST00000475213 SH2D3AQ9BRG2 576 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 RGS18Q9NS28 235 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 LRFN2Q9ULH4 789 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 LIMCH1Q9UPQ0 1083 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
SSR1-205ENST00000475213 IGKV6-21A0A0C4DH24 114 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 BTBD18B2RXH4 712 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 C9IYK1 514 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 MARCH6O60337 910 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 BMP1P13497 986 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
SSR1-205ENST00000475213 QARSP47897 775 aaKnown RBP13.75□□□□□ -0.21
SSR1-205ENST00000475213 GATMP50440 423 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 KCNQ1P51787 676 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 DRP2Q13474 957 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 TRIM29Q14134 588 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 DSC3Q14574 896 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 PAN2Q504Q3 1202 aaKnown RBP13.75□□□□□ -0.21
SSR1-205ENST00000475213 SLC24A5Q71RS6 500 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 ANO5Q75V66 913 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 DIS3L2Q8IYB7 885 aaKnown RBP13.75□□□□□ -0.21
SSR1-205ENST00000475213 IL27Q8NEV9 243 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 ADAMTS19Q8TE59 1207 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 KIF2CQ99661 725 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 C11orf84Q9BUA3 381 aaPredicted RBP13.75□□□□□ -0.21
SSR1-205ENST00000475213 C1orf112Q9NSG2 853 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
SSR1-205ENST00000475213 MRPL42Q9Y6G3 142 aaKnown RBP13.75□□□□□ -0.21
SSR1-205ENST00000475213 ARID2Q68CP9 1835 aa13.74□□□□□ -0.21
SSR1-205ENST00000475213 BDP1A6H8Y1 2624 aa13.74□□□□□ -0.21
SSR1-205ENST00000475213 BAG4O95429 457 aaKnown RBP13.74□□□□□ -0.21
SSR1-205ENST00000475213 P4HBP07237 508 aaKnown RBP13.74□□□□□ -0.21
SSR1-205ENST00000475213 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
SSR1-205ENST00000475213 PLA2G4FQ68DD2 849 aa13.74□□□□□ -0.21
SSR1-205ENST00000475213 CCDC83Q8IWF9 413 aa13.74□□□□□ -0.21
SSR1-205ENST00000475213 SLFN12Q8IYM2 578 aa13.74□□□□□ -0.21
SSR1-205ENST00000475213 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
SSR1-205ENST00000475213 PLVAPQ9BX97 442 aa13.74□□□□□ -0.21
SSR1-205ENST00000475213 WRAP73Q9P2S5 460 aaPredicted RBP13.74□□□□□ -0.21
SSR1-205ENST00000475213 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
SSR1-205ENST00000475213 WNT7AO00755 349 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 GRM6O15303 877 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.21
SSR1-205ENST00000475213 MAFO75444 373 aaPredicted RBP13.73□□□□□ -0.21
SSR1-205ENST00000475213 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
SSR1-205ENST00000475213 FAM189BP81408 668 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 SPIRE1Q08AE8 756 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 EPHA7Q15375 998 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 FAM102BQ5T8I3 360 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 NCAPH2Q6IBW4 605 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 SCLT1Q96NL6 688 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 UHRF1Q96T88 793 aaPredicted RBP13.73□□□□□ -0.21
SSR1-205ENST00000475213 CYP26B1Q9NR63 512 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 PLXNA4Q9HCM2 1894 aa13.73□□□□□ -0.21
SSR1-205ENST00000475213 TBKBP1A7MCY6 615 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 TNFRSF10AO00220 468 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 CSDE1O75534 798 aaKnown RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 ZSCAN20P17040 1043 aaPredicted RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 FGFR4P22455 802 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 DNM2P50570 870 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 NPEPPSP55786 919 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 CDC42EP1Q00587 391 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 GUCY1B3Q02153 619 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 CALCRLQ16602 461 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 TCEAL5Q5H9L2 206 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 C4orf19Q8IY42 314 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 P2RX5Q93086 422 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 DYDC2Q96IM9 177 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 ZSCAN31Q96LW9 406 aaPredicted RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 LLPHQ9BRT6 129 aaKnown RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 LXNQ9BS40 222 aa13.72□□□□□ -0.21
SSR1-205ENST00000475213 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
SSR1-205ENST00000475213 LMAN2LQ9H0V9 348 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms