RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 NYXQ9GZU5 481 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 SEMA4AQ9H3S1 761 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 NUP98P52948 1817 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 KCNA4P22459 653 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 ELF1P32519 619 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 PMS2P54278 862 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 CD302Q8IX05 232 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 MREGQ8N565 214 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 RTFDC1Q9BY42 306 aaPredicted RBP13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 ADAM33Q9BZ11 813 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 THAP2Q9H0W7 228 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 SLC12A6Q9UHW9 1150 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 H0YGN5 161 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 FAM13AO94988 1023 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 TMEM119Q4V9L6 283 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 BTBD6Q96KE9 485 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 KCTD10Q9H3F6 313 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 NFS1Q9Y697 457 aa13.09□□□□□ -0.31
SKIV2L-208ENST00000474839 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 CALUO43852 315 aaPredicted RBP13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 ACCSLQ4AC99 568 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 POTEAQ6S8J7 498 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 SYN2Q92777 582 aaPredicted RBP13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 SGSM3Q96HU1 749 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 IGSF9BQ9UPX0 1349 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 LRIG3Q6UXM1 1119 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 FAM186BQ8IYM0 893 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 ACTRT1Q8TDG2 376 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 RIOX1Q9H6W3 641 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 ZBTB21Q9ULJ3 1066 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 MYH3P11055 1940 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 PLCH1Q4KWH8 1693 aa13.08□□□□□ -0.32
SKIV2L-208ENST00000474839 RASSF9O75901 435 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 GPSM2P81274 684 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 LONRF1Q17RB8 773 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 ZFYVE27Q5T4F4 411 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 POP1Q99575 1024 aaKnown RBP13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 LBHD1Q9BQE6 289 aaPredicted RBP13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 ANO3Q9BYT9 981 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 RAB17Q9H0T7 212 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 ACTR5Q9H9F9 607 aaPredicted RBP13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 SWAP70Q9UH65 585 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 PARP4Q9UKK3 1724 aaKnown RBP13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 CCDC188H7C350 402 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 RPL13P26373 211 aaKnown RBP13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 GJC1P36383 396 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 HOOK3Q86VS8 718 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 LRRC57Q8N9N7 239 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 HOOK2Q96ED9 719 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 TTLL1O95922 423 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 RXRBP28702 533 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 GIT2Q14161 759 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 STAMBPL1Q96FJ0 436 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 CALR3Q96L12 384 aaKnown RBP13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 FAM118BQ9BPY3 351 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 RUSC1Q9BVN2 902 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 USP40Q9NVE5 1235 aa13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 BZW2Q9Y6E2 419 aaKnown RBP13.07□□□□□ -0.32
SKIV2L-208ENST00000474839 SPOPO43791 374 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 EXOC3O60645 756 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 PEX19P40855 299 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 TNIP1Q15025 636 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 SEPT14Q6ZU15 432 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 ERMNQ8TAM6 284 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 LNX1Q8TBB1 728 aaPredicted RBP13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 PRCCQ92733 491 aaPredicted RBP13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 TATDN2Q93075 761 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 ABCB11O95342 1321 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 ZBTB5O15062 677 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 PAX7P23759 505 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 ZNF543Q08ER8 600 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 C6orf89Q6UWU4 347 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 CAPN12Q6ZSI9 719 aa13.06□□□□□ -0.32
SKIV2L-208ENST00000474839 CPNE8Q86YQ8 564 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms