RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CD2BP2O95400 341 aaKnown RBP16.97■□□□□ 0.31
VARS-223ENST00000474643 GNL2Q13823 731 aaKnown RBP16.97■□□□□ 0.31
VARS-223ENST00000474643 CLUL1Q15846 466 aa16.97■□□□□ 0.31
VARS-223ENST00000474643 UGCGQ16739 394 aa16.97■□□□□ 0.31
VARS-223ENST00000474643 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
VARS-223ENST00000474643 MOXD1Q6UVY6 613 aa16.97■□□□□ 0.31
VARS-223ENST00000474643 KLHL23Q8NBE8 558 aa16.97■□□□□ 0.31
VARS-223ENST00000474643 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.97■□□□□ 0.31
VARS-223ENST00000474643 OXER1Q8TDS5 423 aa16.97■□□□□ 0.31
VARS-223ENST00000474643 NAP1L4Q99733 375 aaKnown RBP16.97■□□□□ 0.31
VARS-223ENST00000474643 LOXHD1Q8IVV2 1947 aa16.97■□□□□ 0.31
VARS-223ENST00000474643 GRXCR2A6NFK2 248 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 M0R2N6 131 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 ZNF862O60290 1169 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 MGEA5O60502 916 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 GPR32O75388 356 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 PSMD10O75832 226 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 IL9P15248 144 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 GCFC2P16383 781 aaKnown RBP16.96■□□□□ 0.31
VARS-223ENST00000474643 EIF4BP23588 611 aaKnown RBP16.96■□□□□ 0.31
VARS-223ENST00000474643 CDC42EP1Q00587 391 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 NPY5RQ15761 445 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 CSPP1Q1MSJ5 1256 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 NEK8Q86SG6 692 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 DIS3L2Q8IYB7 885 aaKnown RBP16.96■□□□□ 0.31
VARS-223ENST00000474643 GJD3Q8N144 294 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.31
VARS-223ENST00000474643 GCOM2Q9BZD3 368 aaPredicted RBP16.96■□□□□ 0.31
VARS-223ENST00000474643 TMEM161AQ9NX61 479 aa16.96■□□□□ 0.31
VARS-223ENST00000474643 EVPLQ92817 2033 aa16.96■□□□□ 0.3
VARS-223ENST00000474643 CYP3A7-CYP3A51PA0A087WV96 503 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 ITGB1P05556 798 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 FGFR1P11362 822 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 CYP3A7P24462 503 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 GPC3P51654 580 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 HYAL1Q12794 435 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 NR5A1Q13285 461 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 FAM102BQ5T8I3 360 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 NEK9Q8TD19 979 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
VARS-223ENST00000474643 BTBD18B2RXH4 712 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 C9IYK1 514 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
VARS-223ENST00000474643 LAG3P18627 525 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 SFPQP23246 707 aaKnown RBP eCLIP16.94■□□□□ 0.3
VARS-223ENST00000474643 PSMC5P62195 406 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 TMEM31Q5JXX7 168 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 RBM23Q86U06 439 aaKnown RBP16.94■□□□□ 0.3
VARS-223ENST00000474643 FAM178BQ8IXR5 827 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 SLC7A3Q8WY07 619 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 CCDC43Q96MW1 224 aaKnown RBP16.94■□□□□ 0.3
VARS-223ENST00000474643 POP1Q99575 1024 aaKnown RBP16.94■□□□□ 0.3
VARS-223ENST00000474643 ELAC1Q9H777 363 aaKnown RBP16.94■□□□□ 0.3
VARS-223ENST00000474643 PUF60Q9UHX1 559 aaKnown RBP16.94■□□□□ 0.3
VARS-223ENST00000474643 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
VARS-223ENST00000474643 BRWD1Q9NSI6 2320 aa16.94■□□□□ 0.3
VARS-223ENST00000474643 SLC37A4O43826 429 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 LINC00271P0C7V0 271 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 SRGAP2BP0DMP2 458 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 DARSP14868 501 aaKnown RBP16.93■□□□□ 0.3
VARS-223ENST00000474643 CA8P35219 290 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 NRIP1P48552 1158 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 POLGP54098 1239 aaPredicted RBP16.93■□□□□ 0.3
VARS-223ENST00000474643 UBE3AQ05086 875 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 TWF2Q6IBS0 349 aaKnown RBP16.93■□□□□ 0.3
VARS-223ENST00000474643 RHPN2Q8IUC4 686 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 LRRC43Q8N309 656 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 ETNPPLQ8TBG4 499 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 SPPL3Q8TCT6 385 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 NLRP4Q96MN2 994 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 SH2D3AQ9BRG2 576 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 INO80BQ9C086 356 aaPredicted RBP16.93■□□□□ 0.3
VARS-223ENST00000474643 TMEM117Q9H0C3 514 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 TLE6Q9H808 572 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 ENTPD7Q9NQZ7 604 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 TLR9Q9NR96 1032 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 TYW1Q9NV66 732 aaKnown RBP16.93■□□□□ 0.3
VARS-223ENST00000474643 HCN4Q9Y3Q4 1203 aa16.93■□□□□ 0.3
VARS-223ENST00000474643 FSD2A1L4K1 749 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 FGF18O76093 207 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 FGFR4P22455 802 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 QARSP47897 775 aaKnown RBP16.92■□□□□ 0.3
VARS-223ENST00000474643 KRT17Q04695 432 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 NCAPH2Q6IBW4 605 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 EXOC8Q8IYI6 725 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 CRIPAKQ8N1N5 446 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 COLGALT1Q8NBJ5 622 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 ZNF558Q96NG5 402 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 NIFKQ9BYG3 293 aaKnown RBP16.92■□□□□ 0.3
VARS-223ENST00000474643 ADAMTS10Q9H324 1103 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 EPHX3Q9H6B9 360 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 SUCLA2Q9P2R7 463 aaPredicted RBP16.92■□□□□ 0.3
VARS-223ENST00000474643 PRKAG3Q9UGI9 489 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
VARS-223ENST00000474643 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
VARS-223ENST00000474643 TMEM150BA6NC51 233 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms