RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CYP19A1P11511 503 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 NEFHP12036 1026 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 DRD4P21917 467 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 ELF3P78545 371 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 MRPS35P82673 323 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 RNASELQ05823 741 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 RAPGEF1Q13905 1077 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 NAA25Q14CX7 972 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 PPP1R7Q15435 360 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 NFIL3Q16649 462 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 INF2Q27J81 1249 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 LRIT3Q3SXY7 679 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 TMEM119Q4V9L6 283 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 ZCWPW2Q504Y3 356 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 ASPRV1Q53RT3 343 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 TJAP1Q5JTD0 557 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 TLDC1Q6P9B6 456 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 MOXD1Q6UVY6 613 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 PPP1R21Q6ZMI0 780 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 HEATR3Q7Z4Q2 680 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 APBB1IPQ7Z5R6 666 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 LMNTD2Q8IXW0 634 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 SLFN12Q8IYM2 578 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF444Q8N0Y2 327 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 CMTR1Q8N1G2 835 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 RIBC1Q8N443 379 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 LRRC57Q8N9N7 239 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 KIAA0895Q8NCT3 520 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 BBOF1Q8ND07 529 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 RFFLQ8WZ73 363 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 SAAL1Q96ER3 474 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 CCDC77Q9BR77 488 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 TUBB6Q9BUF5 446 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 LSM14BQ9BX40 385 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 OSBPL7Q9BZF2 842 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 TYW1Q9NV66 732 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 BCCIPQ9P287 314 aaKnown RBP eCLIP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 ABCF2Q9UG63 623 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 TPX2Q9ULW0 747 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 NOVA2Q9UNW9 492 aaKnown RBP8.69□□□□□ -1.02
CCDC93-208ENST00000474546 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 NCANO14594 1321 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 FAM205AQ6ZU69 1335 aa8.69□□□□□ -1.02
CCDC93-208ENST00000474546 NCOR1O75376 2440 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 UBE2Q2LH0YL09 131 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 PDXKO00764 312 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 FKTNO75072 461 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 AFPP02771 609 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 FAM153BP0C7A2 387 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TMEM253P0C7T8 217 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TSPY3P0CV98 308 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TSPY8P0CW00 308 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 XRCC5P13010 732 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 KLRC1P26715 233 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ALDH3A1P30838 453 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 CXCR5P32302 372 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 STAT1P42224 750 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 SSR1P43307 286 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF157P51786 506 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 SEC24CP53992 1094 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 PMS2P54278 862 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 POLR2FP61218 127 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 MAGOHP61326 146 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ERVK-9P63128 1117 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 DR1Q01658 176 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 CHRNDQ07001 517 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TRAF1Q13077 416 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ACVR2BQ13705 512 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 FAM153CQ494X1 144 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 RC3H1Q5TC82 1133 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 HIBCHQ6NVY1 386 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ALKBH5Q6P6C2 394 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ARHGEF18Q6ZSZ5 1173 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 DNAJC10Q8IXB1 793 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 KLHL7Q8IXQ5 586 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 MIGA1Q8NAN2 632 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TPCN2Q8NHX9 752 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 WDR66Q8TBY9 1149 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 CTNNBL1Q8WYA6 563 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 MAGOHBQ96A72 148 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TBC1D31Q96DN5 1066 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 HES6Q96HZ4 224 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 SERPINB12Q96P63 405 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 MTMR9Q96QG7 549 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ERP44Q9BS26 406 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 MKNK1Q9BUB5 465 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 CCDC28BQ9BUN5 200 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 HTATIP2Q9BUP3 242 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF408Q9H9D4 720 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 CD248Q9HCU0 757 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 DCP1AQ9NPI6 582 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 CPSF2Q9P2I0 782 aaKnown RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ARMCX3Q9UH62 379 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 FAM153AQ9UHL3 310 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 NAGPAQ9UK23 515 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms