RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 IRF9Q00978 393 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 RASA3Q14644 834 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 BMS1Q14692 1282 aaKnown RBP5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 FGD2Q7Z6J4 655 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 RTN4RL1Q86UN2 441 aaPredicted RBP5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 C2orf69Q8N8R5 385 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 GSTCDQ8NEC7 633 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 CALML6Q8TD86 181 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 CELF4Q9BZC1 486 aaKnown RBP5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 ZSWIM4Q9H7M6 989 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 MSL2Q9HCI7 577 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 GPRC5BQ9NZH0 403 aa5.37□□□□□ -1.55
TMEM50B-208ENST00000474272 UBE2QL1A1L167 161 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 PMS2P1A4D2B8 440 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 CYP27B1O15528 508 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 RAMP2O60895 175 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 ZBTB48P10074 688 aaPredicted RBP5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 SDHAP31040 664 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 BPIFB4P59827 614 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 ALDH6A1Q02252 535 aaKnown RBP5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 CNGB1Q14028 1251 aaPredicted RBP5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 KLHDC10Q6PID8 442 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 RPUSD2Q8IZ73 545 aaKnown RBP5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 GCDHQ92947 438 aaPredicted RBP5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 PGBD4Q96DM1 585 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 MPHOSPH9Q99550 1183 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 SNTG2Q9NY99 539 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 DENND2AQ9ULE3 1009 aa5.36□□□□□ -1.55
TMEM50B-208ENST00000474272 LOC105371045A0A1W2PR82 267 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 TCRBV16S1A1N1A0A5B0 115 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 HIP1RO75146 1068 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 ADAM8P78325 824 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 PURAQ00577 322 aaKnown RBP5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 SLC6A3Q01959 620 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 MAP3K12Q12852 859 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 ELAVL1Q15717 326 aaKnown RBP5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 TMEM177Q53S58 311 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 FAM111BQ6SJ93 734 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 BRAPQ7Z569 592 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 GSPT2Q8IYD1 628 aaKnown RBP5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 ANKRD35Q8N283 1001 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 MKL1Q969V6 931 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 MIEF2Q96C03 454 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 DEPDC7Q96QD5 511 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 CRAMP1Q96RY5 1269 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 SLC6A15Q9H2J7 730 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 NRDE2Q9H7Z3 1164 aa5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 SAE1Q9UBE0 346 aaPredicted RBP5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 CDK11AQ9UQ88 783 aaPredicted RBP5.35□□□□□ -1.55
TMEM50B-208ENST00000474272 EFCAB14O75071 495 aa5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 H2AFYO75367 372 aaKnown RBP5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 TCIRG1Q13488 830 aa5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 TOB2Q14106 344 aaPredicted RBP5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 ELOA2Q8IYF1 753 aaPredicted RBP5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 ULK2Q8IYT8 1036 aa5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 GPR150Q8NGU9 434 aa5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 SLC7A6OSQ96CW6 309 aaPredicted RBP5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 SRPK1Q96SB4 655 aaKnown RBP5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 DNAJC7Q99615 494 aa5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 GPR87Q9BY21 358 aa5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 VWA7Q9Y334 891 aa5.34□□□□□ -1.55
TMEM50B-208ENST00000474272 XDHP47989 1333 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 DVL2O14641 736 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 FOXN1O15353 648 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 MAN2A2P49641 1150 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 COL10A1Q03692 680 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 NFE2L2Q16236 605 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 LONRF2Q1L5Z9 754 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 LAIR1Q6GTX8 287 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 GIMAP6Q6P9H5 292 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 VRK3Q8IV63 474 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 OR5AN1Q8NGI8 311 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 FOXB1Q99853 325 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 SFMBT1Q9UHJ3 866 aa5.33□□□□□ -1.56
TMEM50B-208ENST00000474272 PPFIA2O75334 1257 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 APPP05067 770 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 BMP5P22003 454 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 KIF11P52732 1056 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 TRIM61Q5EBN2 209 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 CC2D1AQ6P1N0 951 aaPredicted RBP5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 LRP10Q7Z4F1 713 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 MB21D1Q8N884 522 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 NKD2Q969F2 451 aaPredicted RBP5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 GFM2Q969S9 779 aaKnown RBP5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 TCF25Q9BQ70 676 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 IL23AQ9NPF7 189 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 NCDNQ9UBB6 729 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 DNAI1Q9UI46 699 aa5.32□□□□□ -1.56
TMEM50B-208ENST00000474272 M0R2C6 588 aa5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 TOX4O94842 621 aa5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 PRLP01236 227 aa5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 HNRNPLP14866 589 aaKnown RBP eCLIP5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 DGKDQ16760 1214 aa5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 MBNL2Q5VZF2 373 aaKnown RBP5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 MRGPREQ86SM8 312 aa5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 NOP9Q86U38 636 aaKnown RBP5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 JAZF1Q86VZ6 243 aa5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 ATXN2LQ8WWM7 1075 aaKnown RBP5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 LPPQ93052 612 aa5.31□□□□□ -1.56
TMEM50B-208ENST00000474272 MRFAP1L1Q96HT8 127 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms