RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ATP2B1P20020 1258 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 BMPR1AP36894 532 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 GPC3P51654 580 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 C4orf19Q8IY42 314 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 LINC01465Q8N7H1 131 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 TMEM40Q8WWA1 233 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 HLA-CQ95604 372 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 ZNF689Q96CS4 500 aaPredicted RBP20.83■□□□□ 0.93
CCDC171-206ENST00000474193 MRPL38Q96DV4 380 aaKnown RBP20.83■□□□□ 0.93
CCDC171-206ENST00000474193 CEP170P1Q96L14 293 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 ASB2Q96Q27 587 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 PLVAPQ9BX97 442 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 COL25A1Q9BXS0 654 aaPredicted RBP20.83■□□□□ 0.93
CCDC171-206ENST00000474193 TMX1Q9H3N1 280 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 CYP26B1Q9NR63 512 aa20.83■□□□□ 0.93
CCDC171-206ENST00000474193 FAM205CA6NFA0 338 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 TXKP42681 527 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 POLGP54098 1239 aaPredicted RBP20.82■□□□□ 0.92
CCDC171-206ENST00000474193 SPOUT1Q5T280 376 aaKnown RBP20.82■□□□□ 0.92
CCDC171-206ENST00000474193 FAM228AQ86W67 206 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 TPH2Q8IWU9 490 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 LINC01599Q8WXQ3 324 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 CCDC43Q96MW1 224 aaKnown RBP20.82■□□□□ 0.92
CCDC171-206ENST00000474193 LXNQ9BS40 222 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 ADAMTS10Q9H324 1103 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 TTC12Q9H892 705 aaPredicted RBP20.82■□□□□ 0.92
CCDC171-206ENST00000474193 AAASQ9NRG9 546 aa20.82■□□□□ 0.92
CCDC171-206ENST00000474193 SUCLA2Q9P2R7 463 aaPredicted RBP20.82■□□□□ 0.92
CCDC171-206ENST00000474193 RBAK-RBAKDNI3L0D1 243 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 HOXA2O43364 376 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 SYT1P21579 422 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 RFC5P40937 340 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 TIGD5Q53EQ6 642 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 NAALADL2Q58DX5 795 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 ANO5Q75V66 913 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 ZNF410Q86VK4 478 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 RHPN2Q8IUC4 686 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 NEK9Q8TD19 979 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 TCP11Q8WWU5 503 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 CLP1Q92989 425 aaKnown RBP20.81■□□□□ 0.92
CCDC171-206ENST00000474193 LMAN2LQ9H0V9 348 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 ELAC1Q9H777 363 aaKnown RBP20.81■□□□□ 0.92
CCDC171-206ENST00000474193 DACT1Q9NYF0 836 aa20.81■□□□□ 0.92
CCDC171-206ENST00000474193 NOL7Q9UMY1 257 aaKnown RBP20.81■□□□□ 0.92
CCDC171-206ENST00000474193 IGKV6-21A0A0C4DH24 114 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 C5orf67F2Z3F1 127 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 GAS2O43903 313 aaKnown RBP20.8■□□□□ 0.92
CCDC171-206ENST00000474193 STBD1O95210 358 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 DARSP14868 501 aaKnown RBP20.8■□□□□ 0.92
CCDC171-206ENST00000474193 SFPQP23246 707 aaKnown RBP eCLIP20.8■□□□□ 0.92
CCDC171-206ENST00000474193 YWHABP31946 246 aaKnown RBP20.8■□□□□ 0.92
CCDC171-206ENST00000474193 PAN2Q504Q3 1202 aaKnown RBP20.8■□□□□ 0.92
CCDC171-206ENST00000474193 XKR9Q5GH70 373 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 NOSTRINQ8IVI9 506 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 DYDC2Q96IM9 177 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 ZNF668Q96K58 619 aaPredicted RBP20.8■□□□□ 0.92
CCDC171-206ENST00000474193 SH2D3AQ9BRG2 576 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 TMEM161AQ9NX61 479 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 RGL1Q9NZL6 768 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 COL4A6Q14031 1691 aa20.8■□□□□ 0.92
CCDC171-206ENST00000474193 TMEM150BA6NC51 233 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 C9IYK1 514 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 ASAP2O43150 1006 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 STX6O43752 255 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 MGEA5O60502 916 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 MCM7P33993 719 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 CYP4A11Q02928 519 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 ORC2Q13416 577 aaPredicted RBP20.79■□□□□ 0.92
CCDC171-206ENST00000474193 CTTNQ14247 550 aaKnown RBP20.79■□□□□ 0.92
CCDC171-206ENST00000474193 PLA2G4FQ68DD2 849 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 ABI1Q8IZP0 508 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 EIF2AK1Q9BQI3 630 aaKnown RBP20.79■□□□□ 0.92
CCDC171-206ENST00000474193 RC3H2Q9HBD1 1191 aaKnown RBP20.79■□□□□ 0.92
CCDC171-206ENST00000474193 CHST12Q9NRB3 414 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 TSHZ2Q9NRE2 1034 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
CCDC171-206ENST00000474193 PCDHB12Q9Y5F1 795 aa20.79■□□□□ 0.92
CCDC171-206ENST00000474193 TBKBP1A7MCY6 615 aa20.78■□□□□ 0.92
CCDC171-206ENST00000474193 U2AF2P26368 475 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC171-206ENST00000474193 NPEPPSP55786 919 aa20.78■□□□□ 0.92
CCDC171-206ENST00000474193 CRIPAKQ8N1N5 446 aa20.78■□□□□ 0.92
CCDC171-206ENST00000474193 PSPC1Q8WXF1 523 aaKnown RBP20.78■□□□□ 0.92
CCDC171-206ENST00000474193 P2RX5Q93086 422 aa20.78■□□□□ 0.92
CCDC171-206ENST00000474193 PPP2R3CQ969Q6 453 aa20.78■□□□□ 0.92
CCDC171-206ENST00000474193 CHD7Q9P2D1 2997 aa20.78■□□□□ 0.92
CCDC171-206ENST00000474193 RALGAPA2Q2PPJ7 1873 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 A0A087WZ62 844 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 NCK2O43639 380 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 SLITRK3O94933 977 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 SKIP12755 728 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 TRAPPC10P48553 1259 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 FAM189BP81408 668 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 DSC3Q14574 896 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 ERMNQ8TAM6 284 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 NLRP4Q96MN2 994 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 CEP89Q96ST8 783 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 FDXACB1Q9BRP7 624 aaPredicted RBP20.77■□□□□ 0.92
CCDC171-206ENST00000474193 NSUN3Q9H649 340 aaKnown RBP20.77■□□□□ 0.92
CCDC171-206ENST00000474193 COL4A3BPQ9Y5P4 624 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms