RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 TUBGCP4Q9UGJ1 667 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 SLC30A1Q9Y6M5 507 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 KNDC1Q76NI1 1749 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 KIAA1210Q9ULL0 1709 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 USP6P35125 1406 aa8.02□□□□□ -1.13
GPNMB-209ENST00000474157 RGPD8O14715 1765 aaPredicted RBP8.02□□□□□ -1.13
GPNMB-209ENST00000474157 ANKRD62A6NC57 917 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 LRRC10BA6NIK2 292 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 M0R2C6 588 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 CLASP2O75122 1294 aaKnown RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ALX3O95076 343 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ATE1O95260 518 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 PARP1P09874 1014 aaKnown RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 DRD2P14416 443 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 GRK4P32298 578 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ETFBP38117 255 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ZNF75DP51815 510 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ETF1P62495 437 aaKnown RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 TUBA1BP68363 451 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 MRPS25P82663 173 aaKnown RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 SOX4Q06945 474 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ACTN3Q08043 901 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 PPFIA1Q13136 1202 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 BLMHQ13867 455 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ARHGEF6Q15052 776 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 WHAMMP3Q1A5X7 153 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 BOLA3Q53S33 107 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 CMPK2Q5EBM0 449 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 THEMIS2Q5TEJ8 643 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 EMC10Q5UCC4 262 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 THOC7Q6I9Y2 204 aaKnown RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 OLFML1Q6UWY5 402 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 TUBA1AQ71U36 451 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 TMEM130Q8N3G9 435 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 TTC39CQ8N584 583 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 C12orf50Q8NA57 414 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 TAF4BQ92750 862 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 LENG1Q96BZ8 264 aaPredicted RBP8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ZNF653Q96CK0 615 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 EVI5LQ96CN4 794 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 FANCD2OSQ96PS1 177 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 AKTIPQ9H8T0 292 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 MIS18AQ9NYP9 233 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 PCSK1NQ9UHG2 260 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 RAB21Q9UL25 225 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 TACC3Q9Y6A5 838 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 QRICH2Q9H0J4 1663 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 ACEP12821 1306 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 IGSF1Q8N6C5 1336 aa8.01□□□□□ -1.13
GPNMB-209ENST00000474157 LRRD1A4D1F6 860 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 LRRIQ3A6PVS8 624 aaPredicted RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 STXBP3O00186 592 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 MGEA5O60502 916 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 TIAF1O95411 115 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 RPSAP08865 295 aaKnown RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 PLCG1P19174 1290 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 SYT1P21579 422 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 RING1Q06587 406 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 BYSLQ13895 437 aaKnown RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 SGSM1Q2NKQ1 1148 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 CCDC14Q49A88 953 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 ANKRD34AQ69YU3 496 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 BZW1Q7L1Q6 419 aaKnown RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 RSRC2Q7L4I2 434 aaKnown RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 DYMQ7RTS9 669 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 MAATS1Q7Z4T9 603 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 COL23A1Q86Y22 540 aaPredicted RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 CEP57L1Q8IYX8 460 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 TRIML1Q8N9V2 468 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 SMC1BQ8NDV3 1235 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 DYDC1Q8WWB3 177 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 IRGQQ8WZA9 623 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 GOLGA1Q92805 767 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 GCC1Q96CN9 775 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 OPTNQ96CV9 577 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 TBC1D31Q96DN5 1066 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 TTC14Q96N46 770 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 NACC1Q96RE7 527 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 CGREF1Q99674 301 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 UPF3BQ9BZI7 483 aaKnown RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 WNT10AQ9GZT5 417 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 ATXN3LQ9H3M9 355 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 CD248Q9HCU0 757 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 DISC1Q9NRI5 854 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 COMMD8Q9NX08 183 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 SEPT10Q9P0V9 454 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 REV1Q9UBZ9 1251 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 CARD8Q9Y2G2 431 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 SLC4A7Q9Y6M7 1214 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 ADGRB1O14514 1584 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 SH3TC1Q8TE82 1336 aa8□□□□□ -1.13
GPNMB-209ENST00000474157 WDR33Q9C0J8 1336 aaKnown RBP8□□□□□ -1.13
GPNMB-209ENST00000474157 TULP4Q9NRJ4 1543 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 CFAP69A5D8W1 941 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 SMIM24O75264 130 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 TBCAO75347 108 aaKnown RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 MBD4O95243 580 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 EIF2S1P05198 315 aaKnown RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 PGRP06401 933 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms