RNA–Protein interactions for RNA: ENST00000474106.5

SVIL-208, Transcript of supervillin, humanhuman

TSL 4

Gene SVIL, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-208ENST00000474106 DMP1Q13316 513 aaPredicted RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 IRF5Q13568 498 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 TARBP2Q15633 366 aaKnown RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 FSCN1Q16658 493 aaKnown RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 COBLL1Q53SF7 1204 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 BRDTQ58F21 947 aaPredicted RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 TTI2Q6NXR4 508 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 DRC7Q8IY82 874 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 SYCP3Q8IZU3 236 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 ASAP3Q8TDY4 903 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 ZNF668Q96K58 619 aaPredicted RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 DUSP9Q99956 384 aaKnown RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 OLFML3Q9NRN5 406 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
SVIL-208ENST00000474106 MAGEC2Q9UBF1 373 aaPredicted RBP13.21□□□□□ -0.29
SVIL-208ENST00000474106 LRRIQ4A6NIV6 560 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 A6NJR5 290 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 CLIC2O15247 247 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 SEPT4O43236 478 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
SVIL-208ENST00000474106 MAFO75444 373 aaPredicted RBP13.2□□□□□ -0.3
SVIL-208ENST00000474106 MYCP01106 439 aaPredicted RBP13.2□□□□□ -0.3
SVIL-208ENST00000474106 GNRH1P01148 92 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 INHAP05111 366 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 NPTX2P47972 431 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 PSEN2P49810 448 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 SMTNP53814 917 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 PPFIA1Q13136 1202 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 DRP2Q13474 957 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 KNOP1Q1ED39 458 aaKnown RBP13.2□□□□□ -0.3
SVIL-208ENST00000474106 CENPPQ6IPU0 288 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 EPM2AIP1Q7L775 607 aaPredicted RBP13.2□□□□□ -0.3
SVIL-208ENST00000474106 ZNF720Q7Z2F6 126 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 NOC3LQ8WTT2 800 aaKnown RBP13.2□□□□□ -0.3
SVIL-208ENST00000474106 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 HSD3B7Q9H2F3 369 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
SVIL-208ENST00000474106 SPC25Q9HBM1 224 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 PDLIM7Q9NR12 457 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 NRBP1Q9UHY1 535 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
SVIL-208ENST00000474106 KCNJ18B7U540 433 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 PES1O00541 588 aaKnown RBP13.19□□□□□ -0.3
SVIL-208ENST00000474106 EIF3DO15371 548 aaKnown RBP eCLIP13.19□□□□□ -0.3
SVIL-208ENST00000474106 CALUO43852 315 aaPredicted RBP13.19□□□□□ -0.3
SVIL-208ENST00000474106 CLCN3P51790 818 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 ZNF75DP51815 510 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 MFSD10Q14728 455 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 GRIK4Q16099 956 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 KIAA0753Q2KHM9 967 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 ZNF484Q5JVG2 852 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 EFCAB12Q6NXP0 572 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 HAUS6Q7Z4H7 955 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 FIZ1Q96SL8 496 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 CEP89Q96ST8 783 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 XPNPEP3Q9NQH7 507 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 SETD4Q9NVD3 440 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 TAB2Q9NYJ8 693 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 Q9Y3F1 56 aa13.19□□□□□ -0.3
SVIL-208ENST00000474106 DENND3A2RUS2 1198 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
SVIL-208ENST00000474106 GJB1P08034 283 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 SRGAP2CP0DJJ0 459 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 GLRA2P23416 452 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 KLRC1P26715 233 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 HOXD13P35453 343 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 ARL2P36404 184 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 MTIF2P46199 727 aaKnown RBP13.18□□□□□ -0.3
SVIL-208ENST00000474106 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 UBASH3AP57075 661 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 LRRC63Q05C16 580 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 CCDC173Q0VFZ6 552 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 PTPN21Q16825 1174 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 RHPN2Q8IUC4 686 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 SH3TC2Q8TF17 1288 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
SVIL-208ENST00000474106 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 XPO4Q9C0E2 1151 aaKnown RBP13.18□□□□□ -0.3
SVIL-208ENST00000474106 VPS16Q9H269 839 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 KCTD10Q9H3F6 313 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
SVIL-208ENST00000474106 SUCLA2Q9P2R7 463 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms