RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 CCDC122Q5T0U0 273 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 TCERG1LQ5VWI1 586 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 PADI6Q6TGC4 694 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 TRAPPC11Q7Z392 1133 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 REPS2Q8NFH8 660 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 BAP1Q92560 729 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 MAP3K20Q9NYL2 800 aaKnown RBP23.09■■□□□ 1.29
RNF220-209ENST00000474064 ZNF214Q9UL59 606 aaPredicted RBP23.09■■□□□ 1.29
RNF220-209ENST00000474064 C19orf81C9J6K1 198 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 PEX10O60683 326 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 IPO7O95373 1038 aaKnown RBP23.09■■□□□ 1.29
RNF220-209ENST00000474064 POLR2FP61218 127 aaKnown RBP23.09■■□□□ 1.29
RNF220-209ENST00000474064 EP400NLQ6ZTU2 488 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 SELENOOQ9BVL4 669 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 TCEAL9Q9UHQ7 104 aa23.09■■□□□ 1.29
RNF220-209ENST00000474064 RCCD1A6NED2 376 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 TGFB1I1O43294 461 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 MUTP22033 750 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 USP8P40818 1118 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 KRT83P78385 493 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 UGCGQ16739 394 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 BMT2Q1RMZ1 405 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 CNKSR2Q8WXI2 1034 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 IQCDQ96DY2 449 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 CAPZA3Q96KX2 299 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 CAPS2Q9BXY5 557 aa23.08■■□□□ 1.29
RNF220-209ENST00000474064 USP2O75604 605 aaPredicted RBP23.08■■□□□ 1.28
RNF220-209ENST00000474064 NOL4O94818 638 aa23.08■■□□□ 1.28
RNF220-209ENST00000474064 FDX1P10109 184 aa23.08■■□□□ 1.28
RNF220-209ENST00000474064 CATSPERGQ6ZRH7 1159 aa23.08■■□□□ 1.28
RNF220-209ENST00000474064 CCDC170Q8IYT3 715 aa23.08■■□□□ 1.28
RNF220-209ENST00000474064 POLR2AP24928 1970 aaKnown RBP23.07■■□□□ 1.28
RNF220-209ENST00000474064 ADM5C9JUS6 153 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 SORBS3O60504 671 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 EIF4A3P38919 411 aaKnown RBP23.07■■□□□ 1.28
RNF220-209ENST00000474064 TTC19Q6DKK2 380 aaPredicted RBP23.07■■□□□ 1.28
RNF220-209ENST00000474064 C12orf42Q96LP6 360 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 FIZ1Q96SL8 496 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 HINFPQ9BQA5 517 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 LACRTQ9GZZ8 138 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 TBC1D22BQ9NU19 505 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 AFG3L2Q9Y4W6 797 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 ZMYM2Q9UBW7 1377 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 MYCNP04198 464 aaPredicted RBP23.07■■□□□ 1.28
RNF220-209ENST00000474064 QARSP47897 775 aaKnown RBP23.07■■□□□ 1.28
RNF220-209ENST00000474064 PDXDC1Q6P996 788 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 ZNF720Q7Z2F6 126 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.07■■□□□ 1.286e-8■□□□□ 9.8
RNF220-209ENST00000474064 NEK9Q8TD19 979 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 JAKMIP2Q96AA8 810 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 DONSONQ9NYP3 566 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 RNF181Q9P0P0 153 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 FAM184BQ9ULE4 1060 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 DUSP10Q9Y6W6 482 aa23.07■■□□□ 1.28
RNF220-209ENST00000474064 GOLGA6BA6NDN3 693 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 ZNF263O14978 683 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 USO1O60763 962 aaKnown RBP23.06■■□□□ 1.28
RNF220-209ENST00000474064 NR3C2P08235 984 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 VGLL4Q14135 290 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 DAW1Q8N136 415 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 CCDC43Q96MW1 224 aaKnown RBP23.06■■□□□ 1.28
RNF220-209ENST00000474064 CCNE2O96020 404 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 ATP1A1P05023 1023 aaKnown RBP23.06■■□□□ 1.28
RNF220-209ENST00000474064 ACTN1P12814 892 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 XRCC5P13010 732 aaKnown RBP23.06■■□□□ 1.28
RNF220-209ENST00000474064 RPL13P26373 211 aaKnown RBP23.06■■□□□ 1.28
RNF220-209ENST00000474064 PPFIA1Q13136 1202 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 ENOX2Q16206 610 aaKnown RBP23.06■■□□□ 1.28
RNF220-209ENST00000474064 FRMD5Q7Z6J6 570 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 HAUS4Q9H6D7 363 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 PNMA2Q9UL42 364 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 ODF2LQ9ULJ1 636 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 PPP2R3BQ9Y5P8 575 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 SAR1BQ9Y6B6 198 aa23.06■■□□□ 1.28
RNF220-209ENST00000474064 HNRNPH3P31942 346 aaKnown RBP23.05■■□□□ 1.28
RNF220-209ENST00000474064 ZNF131P52739 623 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 SP4Q02446 784 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 ARID5AQ03989 594 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 SPON1Q9HCB6 807 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 CLGNO14967 610 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 EIF3DO15371 548 aaKnown RBP eCLIP23.05■■□□□ 1.28
RNF220-209ENST00000474064 EIF3HO15372 352 aaKnown RBP eCLIP23.05■■□□□ 1.28
RNF220-209ENST00000474064 EPB41P11171 864 aaKnown RBP23.05■■□□□ 1.28
RNF220-209ENST00000474064 GNGT1P63211 74 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 CDK17Q00537 523 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 MAPK7Q13164 816 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 SPA17Q15506 151 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 CEP72Q9P209 647 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 SUFUQ9UMX1 484 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 GRIN2DO15399 1336 aa23.05■■□□□ 1.28
RNF220-209ENST00000474064 COL11A1P12107 1806 aaPredicted RBP23.05■■□□□ 1.28
RNF220-209ENST00000474064 SPDYE16A6NNV3 312 aaPredicted RBP23.04■■□□□ 1.28
RNF220-209ENST00000474064 AKR1B10O60218 316 aa23.04■■□□□ 1.28
RNF220-209ENST00000474064 SLC9A1P19634 815 aa23.04■■□□□ 1.28
RNF220-209ENST00000474064 CCND2P30279 289 aa23.04■■□□□ 1.28
RNF220-209ENST00000474064 YWHABP31946 246 aaKnown RBP23.04■■□□□ 1.28
RNF220-209ENST00000474064 RARRES1P49788 294 aa23.04■■□□□ 1.28
RNF220-209ENST00000474064 CYP2J2P51589 502 aa23.04■■□□□ 1.28
RNF220-209ENST00000474064 KIF11P52732 1056 aa23.04■■□□□ 1.28
RNF220-209ENST00000474064 TDRD12Q587J7 1177 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms