RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 EPSTI1Q96J88 318 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 SPATA32Q96LK8 384 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 PNMA5Q96PV4 448 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 OSMRQ99650 979 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 PRO3102Q9H379 93 aa13.81□□□□□ -0.2
DDX56-209ENST00000473924 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
DDX56-209ENST00000473924 A0A1W2PPC1 479 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 GPR32O75388 356 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 GPC3P51654 580 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 IKBKEQ14164 716 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 LPIN1Q14693 890 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 PLEKHG4Q58EX7 1191 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 ODR4Q5SWX8 454 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 TSHZ1Q6ZSZ6 1077 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 KCNK18Q7Z418 384 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 PRPF31Q8WWY3 499 aaKnown RBP13.8□□□□□ -0.2
DDX56-209ENST00000473924 APBB2Q92870 758 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 NLRP4Q96MN2 994 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 CCSER1Q9C0I3 900 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 CDHR5Q9HBB8 845 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 XPNPEP1Q9NQW7 623 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 TSHZ2Q9NRE2 1034 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 RCOR1Q9UKL0 485 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
DDX56-209ENST00000473924 COL4A3BPQ9Y5P4 624 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 SQORQ9Y6N5 450 aa13.8□□□□□ -0.2
DDX56-209ENST00000473924 ASAP2O43150 1006 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 BAIAP3O94812 1187 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 CYP11B2P19099 503 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 PLCG1P19174 1290 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 CD52P31358 61 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 PAK2Q13177 524 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 MXD4Q14582 209 aaPredicted RBP13.79□□□□□ -0.2
DDX56-209ENST00000473924 TMEM119Q4V9L6 283 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 FAM102BQ5T8I3 360 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 USP49Q70CQ1 688 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 KSR1Q8IVT5 923 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 HERVK_113Q902F9 699 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 VWCEQ96DN2 955 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 CHAMP1Q96JM3 812 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
DDX56-209ENST00000473924 OSBPL7Q9BZF2 842 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 SCAND2PQ9GZW5 306 aaPredicted RBP13.79□□□□□ -0.2
DDX56-209ENST00000473924 ADAMTS10Q9H324 1103 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 LOXHD1Q8IVV2 1947 aa13.79□□□□□ -0.2
DDX56-209ENST00000473924 SIP14410 1827 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 A0A087WZ62 844 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 ABHD14A-ACY1A0A1B0GW23 586 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 GPR182O15218 404 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 EFCAB14O75071 495 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 PLA2G4BP0C869 781 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 EIF4BP23588 611 aaKnown RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 KCNJ6P48051 423 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 LAMTOR4Q0VGL1 99 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 TFDP1Q14186 410 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 DHX8Q14562 1220 aaKnown RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 RRAGBQ5VZM2 374 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 ZNF410Q86VK4 478 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 SYT2Q8N9I0 419 aaPredicted RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 TMEM40Q8WWA1 233 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 FDXACB1Q9BRP7 624 aaPredicted RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 INO80BQ9C086 356 aaPredicted RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 AGO3Q9H9G7 860 aaKnown RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 GPRC5CQ9NQ84 441 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 PCDHA7Q9UN72 937 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 NOC2LQ9Y3T9 749 aaKnown RBP13.78□□□□□ -0.2
DDX56-209ENST00000473924 SLC4A7Q9Y6M7 1214 aa13.78□□□□□ -0.2
DDX56-209ENST00000473924 RBAK-RBAKDNI3L0D1 243 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 DARSP14868 501 aaKnown RBP13.77□□□□□ -0.21
DDX56-209ENST00000473924 ARL2P36404 184 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 RINT1Q6NUQ1 792 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 TET1Q8NFU7 2136 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 PANK2Q9BZ23 570 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 FAM13BQ9NYF5 915 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 CHMP5Q9NZZ3 219 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
DDX56-209ENST00000473924 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
DDX56-209ENST00000473924 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
DDX56-209ENST00000473924 STAT6P42226 847 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 PHKA2P46019 1235 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 SLC12A3P55017 1021 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 MCM6Q14566 821 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 TCTN1Q2MV58 587 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 TPRNQ4KMQ1 711 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
DDX56-209ENST00000473924 SHC4Q6S5L8 630 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 PDILTQ8N807 584 aa13.76□□□□□ -0.21
DDX56-209ENST00000473924 ASAP3Q8TDY4 903 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms