RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-205	ENST00000473883	METTL3	Q86U44	580 aa	Known RBP	13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	ITIH5	Q86UX2	942 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	LZTR1	Q8N653	840 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	UCMA	Q8WVF2	138 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	IFT74	Q96LB3	600 aa		13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	API5	Q9BZZ5	524 aa	Known RBP	13.62	□□□□□ -0.23
HCLS1-205	ENST00000473883	IFIT3	O14879	490 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	ATP2C2	O75185	946 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	BAIAP3	O94812	1187 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	PABPC1	P11940	636 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	HSPA9	P38646	679 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	RASGRF1	Q13972	1273 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	TMEM139	Q8IV31	216 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	ANKS4B	Q8N8V4	417 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	PLEKHO2	Q8TD55	490 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	GPATCH1	Q9BRR8	931 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	BEGAIN	Q9BUH8	593 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	EPB41L1	Q9H4G0	881 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	ARMC1	Q9NVT9	282 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	YEATS4	O95619	227 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	RGS2	P41220	211 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	PRCP	P42785	496 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	COPA	P53621	1224 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	MARS	P56192	900 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	AKAP4	Q5JQC9	854 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	TMC7	Q7Z402	723 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	PASD1	Q8IV76	773 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	FAM9C	Q8IZT9	166 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	ANGPTL6	Q8NI99	470 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	CTRC	Q99895	268 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	RNPEPL1	Q9HAU8	725 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	IVNS1ABP	Q9Y6Y0	642 aa		13.61	□□□□□ -0.23
HCLS1-205	ENST00000473883	PIK3CD	O00329	1044 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	ACE	P12821	1306 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	PHB	P35232	272 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	GSS	P48637	474 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	MLLT6	P55198	1093 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZC3H6	P61129	1189 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	REL	Q04864	619 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	ITIH4	Q14624	930 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	MROH7	Q68CQ1	1323 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	TPTE2	Q6XPS3	522 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	ASAP3	Q8TDY4	903 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	NEK6	Q9HC98	313 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	KLHL3	Q9UH77	587 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	PREX2	Q70Z35	1606 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	SH3PXD2B	A1X283	911 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	CTAGE9	A4FU28	777 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	ICMT	O60725	284 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	KATNA1	O75449	491 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	ATF7	P17544	494 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	TMTC1	Q8IUR5	882 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	PRCC	Q92733	491 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	PPP1R12C	Q9BZL4	782 aa		13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	SEPT11	Q9NVA2	429 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-205	ENST00000473883	C3	P01024	1663 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	KDM6A	O15550	1401 aa	Predicted RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	UHRF1BP1	Q6BDS2	1440 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	TRAPPC8	Q9Y2L5	1435 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	PDS5A	Q29RF7	1337 aa	Known RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	TTC21A	Q8NDW8	1320 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	SMIM31	A0A1B0GVY4	71 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	SYCE1L	A8MT33	242 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	STX10	O60499	249 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	HSF2BP	O75031	334 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	POLR2C	P19387	275 aa	Predicted RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	TMOD1	P28289	359 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	PRKAR1B	P31321	381 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	MSH2	P43246	934 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	CCR3	P51677	355 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	DENND2C	Q68D51	928 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	SPOPL	Q6IQ16	392 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	CHPF	Q8IZ52	775 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	ENDOV	Q8N8Q3	282 aa	Known RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	SLC22A8	Q8TCC7	542 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	CALML6	Q8TD86	181 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	ABCC1	P33527	1531 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	PNPLA6	Q8IY17	1366 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	SULT1B1	O43704	296 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	PAEP	P09466	180 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	RPL9	P32969	192 aa	Known RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	HOXD13	P35453	343 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	HNF1B	P35680	557 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	ATN1	P54259	1190 aa	Predicted RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	POLR2G	P62487	172 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	QPCT	Q16769	361 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	EGFLAM	Q63HQ2	1017 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	C4orf22	Q6V702	233 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	NOP9	Q86U38	636 aa	Known RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	ARHGAP24	Q8N264	748 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	CAGE1	Q8TC20	777 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	STK32A	Q8WU08	396 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	TMA16	Q96EY4	203 aa	Known RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	ZNF333	Q96JL9	665 aa		13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	NIFK	Q9BYG3	293 aa	Known RBP	13.59	□□□□□ -0.23
HCLS1-205	ENST00000473883	UNK	Q9C0B0	810 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms