RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 ZNF710Q8N1W2 664 aa14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 FBXO18Q8NFZ0 1043 aa14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 ZBTB10Q96DT7 871 aa14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 PHOX2BQ99453 314 aa14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 POP1Q99575 1024 aaKnown RBP14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 C11orf84Q9BUA3 381 aaPredicted RBP14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 CELF4Q9BZC1 486 aaKnown RBP14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 LMAN2LQ9H0V9 348 aa14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 VAV3Q9UKW4 847 aa14.56□□□□□ -0.08
SHROOM3-204ENST00000473602 MARCH6O60337 910 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 FOSBP53539 338 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 PSMC5P62195 406 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 SMAD4Q13485 552 aaKnown RBP14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 XKR3Q5GH77 459 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 KIAA0319LQ8IZA0 1049 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 EDAQ92838 391 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 HAS1Q92839 578 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 FTHL17Q9BXU8 183 aa14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 NIFKQ9BYG3 293 aaKnown RBP14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 FOXP1Q9H334 677 aaPredicted RBP14.55□□□□□ -0.08
SHROOM3-204ENST00000473602 ZNF318Q5VUA4 2279 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 ENPP3O14638 875 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 LINC01565O15544 149 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 NEMFO60524 1076 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 TBX10O75333 385 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 TMOD1P28289 359 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 ORC2Q13416 577 aaPredicted RBP14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 ODR4Q5SWX8 454 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 IER5LQ5T953 404 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 TRMT1LQ7Z2T5 733 aaKnown RBP14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 CLP1Q92989 425 aaKnown RBP14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 MAP7D2Q96T17 732 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 CD207Q9UJ71 328 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 RWDD3Q9Y3V2 267 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 ARID2Q68CP9 1835 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 USP34Q70CQ2 3546 aa14.54□□□□□ -0.08
SHROOM3-204ENST00000473602 TTC3P53804 2025 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 ADGRA3Q8IWK6 1321 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 QARSP47897 775 aaKnown RBP14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 GUCY1B3Q02153 619 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 SPIRE1Q08AE8 756 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 TMEM62Q0P6H9 643 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 ADAM15Q13444 863 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 BTG3Q14201 252 aaPredicted RBP14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 EPHA7Q15375 998 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 TARBP2Q15633 366 aaKnown RBP14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 CALCRLQ16602 461 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 METTL13Q8N6R0 699 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 LINC01465Q8N7H1 131 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 TMX3Q96JJ7 454 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 SNX27Q96L92 541 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 AGO3Q9H9G7 860 aaKnown RBP14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 RC3H2Q9HBD1 1191 aaKnown RBP14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 ALG13Q9NP73 1137 aaKnown RBP14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 SEPT9Q9UHD8 586 aaPredicted RBP14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 PLAGL2Q9UPG8 496 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 PPME1Q9Y570 386 aa14.53□□□□□ -0.08
SHROOM3-204ENST00000473602 RALGAPA2Q2PPJ7 1873 aa14.52□□□□□ -0.08
SHROOM3-204ENST00000473602 TECTAO75443 2155 aa14.52□□□□□ -0.08
SHROOM3-204ENST00000473602 EML1O00423 815 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 STBD1O95210 358 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 P4HBP07237 508 aaKnown RBP14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 CD52P31358 61 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 TRAPPC10P48553 1259 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 CRYBB1P53674 252 aaPredicted RBP14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 PAK2Q13177 524 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 GNL2Q13823 731 aaKnown RBP14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 CAMK1Q14012 370 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 EFCAB12Q6NXP0 572 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 BMP8AQ7Z5Y6 402 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 NOSTRINQ8IVI9 506 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 PRSS33Q8NF86 280 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 PBXIP1Q96AQ6 731 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 JPH2Q9BR39 696 aaPredicted RBP14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 BACH2Q9BYV9 841 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 PCDHA12Q9UN75 941 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 NLRC5Q86WI3 1866 aa14.52□□□□□ -0.09
SHROOM3-204ENST00000473602 TMEM221A6NGB7 291 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 M0R296 226 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 EYA4O95677 639 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 NDUFV1P49821 464 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 CLCN3P51790 818 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 CDC42EP1Q00587 391 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 NCAPH2Q6IBW4 605 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 TRIM67Q6ZTA4 783 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 C4orf19Q8IY42 314 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 EXOC8Q8IYI6 725 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 ZNF689Q96CS4 500 aaPredicted RBP14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 MSLNLQ96KJ4 702 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 MTMR9Q96QG7 549 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 PLVAPQ9BX97 442 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 TTC12Q9H892 705 aaPredicted RBP14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 PADI3Q9ULW8 664 aa14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 NOL7Q9UMY1 257 aaKnown RBP14.51□□□□□ -0.09
SHROOM3-204ENST00000473602 IGKV6-21A0A0C4DH24 114 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 GPR182O15218 404 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 GPR32O75388 356 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 RPS6KA5O75582 802 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms