RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 VTNP04004 478 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 STAG3L1P0CL83 205 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 SYT1P21579 422 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 TXKP42681 527 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 NFX1Q12986 1120 aaKnown RBP20.24■□□□□ 0.83
SNX4-204ENST00000473417 PPP2R5CQ13362 524 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 KIZQ2M2Z5 673 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 ODR4Q5SWX8 454 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 METTL13Q8N6R0 699 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 SPRYD3Q8NCJ5 442 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 MTMR9Q96QG7 549 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 OSMRQ99650 979 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 C11orf84Q9BUA3 381 aaPredicted RBP20.24■□□□□ 0.83
SNX4-204ENST00000473417 PCDHA12Q9UN75 941 aa20.24■□□□□ 0.83
SNX4-204ENST00000473417 GPR32O75388 356 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 SARSP49591 514 aaKnown RBP20.23■□□□□ 0.83
SNX4-204ENST00000473417 CLCN3P51790 818 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 NCAPH2Q6IBW4 605 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 FAM228AQ86W67 206 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 BANK1Q8NDB2 785 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 PPP1R16BQ96T49 567 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 LMAN2LQ9H0V9 348 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 TTC12Q9H892 705 aaPredicted RBP20.23■□□□□ 0.83
SNX4-204ENST00000473417 PCDHB6Q9Y5E3 794 aa20.23■□□□□ 0.83
SNX4-204ENST00000473417 MRPL42Q9Y6G3 142 aaKnown RBP20.23■□□□□ 0.83
SNX4-204ENST00000473417 GPR182O15218 404 aa20.22■□□□□ 0.83
SNX4-204ENST00000473417 EFCAB12Q6NXP0 572 aa20.22■□□□□ 0.83
SNX4-204ENST00000473417 FERMT3Q86UX7 667 aa20.22■□□□□ 0.83
SNX4-204ENST00000473417 PLVAPQ9BX97 442 aa20.22■□□□□ 0.83
SNX4-204ENST00000473417 NSUN3Q9H649 340 aaKnown RBP20.22■□□□□ 0.83
SNX4-204ENST00000473417 RGS18Q9NS28 235 aa20.22■□□□□ 0.83
SNX4-204ENST00000473417 NRBP2Q9NSY0 501 aa20.22■□□□□ 0.83
SNX4-204ENST00000473417 ST3GAL5Q9UNP4 418 aa20.22■□□□□ 0.83
SNX4-204ENST00000473417 GRM6O15303 877 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 OR52Z1P0C646 297 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 SPIRE1Q08AE8 756 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 ORC2Q13416 577 aaPredicted RBP20.21■□□□□ 0.83
SNX4-204ENST00000473417 COL19A1Q14993 1142 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 TARBP2Q15633 366 aaKnown RBP20.21■□□□□ 0.83
SNX4-204ENST00000473417 RILPL1Q5EBL4 403 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 TCEAL5Q5H9L2 206 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 LRRC71Q8N4P6 559 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 P2RX5Q93086 422 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 MAP7D2Q96T17 732 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 ADAM2Q99965 735 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 C1orf112Q9NSG2 853 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 LRFN2Q9ULH4 789 aa20.21■□□□□ 0.83
SNX4-204ENST00000473417 DENND3A2RUS2 1198 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 C9IYK1 514 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 KCNA5P22460 613 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 TMOD1P28289 359 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 NLRP11P59045 1033 aaKnown RBP20.2■□□□□ 0.82
SNX4-204ENST00000473417 EPHA7Q15375 998 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 LEXMQ3ZCV2 418 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 PAN2Q504Q3 1202 aaKnown RBP20.2■□□□□ 0.82
SNX4-204ENST00000473417 SLC24A5Q71RS6 500 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 ZNF710Q8N1W2 664 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 ADAMTS10Q9H324 1103 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
SNX4-204ENST00000473417 AKT3Q9Y243 479 aa20.2■□□□□ 0.82
SNX4-204ENST00000473417 C5orf42Q9H799 3197 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 STBD1O95210 358 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 TECP42680 631 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 GATMP50440 423 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 PSMC5P62195 406 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 PTGDRQ13258 359 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 DSC3Q14574 896 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 C4orf32Q8N8J7 132 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 PABPC5Q96DU9 382 aaKnown RBP20.19■□□□□ 0.82
SNX4-204ENST00000473417 CEP89Q96ST8 783 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 NIFKQ9BYG3 293 aaKnown RBP20.19■□□□□ 0.82
SNX4-204ENST00000473417 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.19■□□□□ 0.82
SNX4-204ENST00000473417 RGL1Q9NZL6 768 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 SEPT9Q9UHD8 586 aaPredicted RBP20.19■□□□□ 0.82
SNX4-204ENST00000473417 MTMR6Q9Y217 621 aa20.19■□□□□ 0.82
SNX4-204ENST00000473417 POTEMA6NI47 508 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 STX6O43752 255 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 P4HBP07237 508 aaKnown RBP20.18■□□□□ 0.82
SNX4-204ENST00000473417 QARSP47897 775 aaKnown RBP20.18■□□□□ 0.82
SNX4-204ENST00000473417 GPC3P51654 580 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 TBC1D8BQ0IIM8 1120 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 CTTNQ14247 550 aaKnown RBP20.18■□□□□ 0.82
SNX4-204ENST00000473417 NAALADL2Q58DX5 795 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 XKR3Q5GH77 459 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 BRAPQ7Z569 592 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.18■□□□□ 0.82
SNX4-204ENST00000473417 NEK9Q8TD19 979 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 DYDC2Q96IM9 177 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 PLAGL2Q9UPG8 496 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 PCDHB7Q9Y5E2 793 aa20.18■□□□□ 0.82
SNX4-204ENST00000473417 TMEM150BA6NC51 233 aa20.17■□□□□ 0.82
SNX4-204ENST00000473417 COL9A1P20849 921 aa20.17■□□□□ 0.82
SNX4-204ENST00000473417 EIF4BP23588 611 aaKnown RBP20.17■□□□□ 0.82
SNX4-204ENST00000473417 CYP4A11Q02928 519 aa20.17■□□□□ 0.82
SNX4-204ENST00000473417 MTERF2Q49AM1 385 aa20.17■□□□□ 0.82
SNX4-204ENST00000473417 EIF2AK1Q9BQI3 630 aaKnown RBP20.17■□□□□ 0.82
SNX4-204ENST00000473417 ALG13Q9NP73 1137 aaKnown RBP20.17■□□□□ 0.82
SNX4-204ENST00000473417 TMEM161AQ9NX61 479 aa20.17■□□□□ 0.82
SNX4-204ENST00000473417 WRAP73Q9P2S5 460 aaPredicted RBP20.17■□□□□ 0.82
SNX4-204ENST00000473417 DDX11L8A8MPP1 907 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms