RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 FAHP16930 419 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 MSX2P35548 267 aaPredicted RBP3.19□□□□□ -1.9
VPS45-206ENST00000472756 IRX6P78412 446 aaPredicted RBP3.19□□□□□ -1.9
VPS45-206ENST00000472756 PFKPQ01813 784 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 LSAMPQ13449 338 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 PCOLCEQ15113 449 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 MBNL2Q5VZF2 373 aaKnown RBP3.19□□□□□ -1.9
VPS45-206ENST00000472756 CD276Q5ZPR3 534 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 SYCE2Q6PIF2 218 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 POMZP3Q6PJE2 187 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 MRGPREQ86SM8 312 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 TRIM48Q8IWZ4 208 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 SLC6A20Q9NP91 592 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 ARHGAP20Q9P2F6 1191 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 GIT1Q9Y2X7 761 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 NPFFR2Q9Y5X5 522 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 INSRP06213 1382 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 ARHGAP23Q9P227 1491 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 TECPR2O15040 1411 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 SMG6Q86US8 1419 aaKnown RBP3.19□□□□□ -1.9
VPS45-206ENST00000472756 EVC2Q86UK5 1308 aa3.19□□□□□ -1.9
VPS45-206ENST00000472756 A0A1W2PP64 1363 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 POLR3AO14802 1390 aaPredicted RBP3.18□□□□□ -1.9
VPS45-206ENST00000472756 ANKRD36BQ8N2N9 1353 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 PLEKHG1Q9ULL1 1385 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 ARHGAP6O43182 974 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 DGKIO75912 1065 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 FBXO21O94952 628 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 LCP1P13796 627 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 ZNF37AP17032 561 aaPredicted RBP3.18□□□□□ -1.9
VPS45-206ENST00000472756 ETV4P43268 484 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 GIPRP48546 466 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 RGS19P49795 217 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 HGFACQ04756 655 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 RRP1BQ14684 758 aaKnown RBP3.18□□□□□ -1.9
VPS45-206ENST00000472756 ZMAT1Q5H9K5 638 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 TRMT2AQ8IZ69 625 aaKnown RBP3.18□□□□□ -1.9
VPS45-206ENST00000472756 TMEM87AQ8NBN3 555 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.18□□□□□ -1.9
VPS45-206ENST00000472756 MICAL1Q8TDZ2 1067 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 C1orf159Q96HA4 380 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 SCYL1Q96KG9 808 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 CRBNQ96SW2 442 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 SYNPO2LQ9H987 977 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 ADARB2Q9NS39 739 aaKnown RBP3.18□□□□□ -1.9
VPS45-206ENST00000472756 NUDCQ9Y266 331 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 SUGT1Q9Y2Z0 365 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 TELO2Q9Y4R8 837 aa3.18□□□□□ -1.9
VPS45-206ENST00000472756 CPSF1Q10570 1443 aaKnown RBP3.18□□□□□ -1.9
VPS45-206ENST00000472756 KDM5AP29375 1690 aaKnown RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 QRICH2Q9H0J4 1663 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 COL3A1P02461 1466 aaPredicted RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 UBR1Q8IWV7 1749 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 RHOBTB3O94955 611 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 NUDT3O95989 172 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 ENO2P09104 434 aaPredicted RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 ZNF16P17020 682 aaPredicted RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 HOXC12P31275 282 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 GLRBP48167 497 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 MTHFSP49914 203 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 ZNF143P52747 638 aaPredicted RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 MFAP1P55081 439 aaKnown RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 ZNF568Q3ZCX4 644 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 PAN2Q504Q3 1202 aaKnown RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 HABP4Q5JVS0 413 aaKnown RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 MORC1Q86VD1 984 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 CCDC146Q8IYE0 955 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 CRACR2BQ8N4Y2 399 aaPredicted RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 ZDHHC5Q9C0B5 715 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 NELFAQ9H3P2 528 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 AGO3Q9H9G7 860 aaKnown RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 POGKQ9P215 609 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 PACSIN3Q9UKS6 424 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 REXO2Q9Y3B8 237 aaKnown RBP3.17□□□□□ -1.9
VPS45-206ENST00000472756 TBX22Q9Y458 520 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 NR2E1Q9Y466 385 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 SLIT1O75093 1534 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 CPS1P31327 1500 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 FAM135BQ49AJ0 1406 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 C3P01024 1663 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 COL4A3Q01955 1670 aa3.17□□□□□ -1.9
VPS45-206ENST00000472756 PNPLA6Q8IY17 1366 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 GRID2IPA4D2P6 1211 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 APAF1O14727 1248 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 SLC27A2O14975 620 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 MYO1BO43795 1136 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 MAFKO60675 156 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 ZNF76P36508 570 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 LTBRP36941 435 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 TNNT2P45379 298 aaPredicted RBP3.16□□□□□ -1.9
VPS45-206ENST00000472756 EPHA5P54756 1037 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 CASP7P55210 303 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 GRIN1Q05586 938 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 SLFN5Q08AF3 891 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 TOB2Q14106 344 aaPredicted RBP3.16□□□□□ -1.9
VPS45-206ENST00000472756 TRIM68Q6AZZ1 485 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 LARP4Q71RC2 724 aaKnown RBP eCLIP3.16□□□□□ -1.9
VPS45-206ENST00000472756 NME9Q86XW9 330 aa3.16□□□□□ -1.9
VPS45-206ENST00000472756 THEMISQ8N1K5 641 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms