RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 FAM212AQ96EL1 285 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 FZD1Q9UP38 647 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 WDR46O15213 610 aaKnown RBP14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 PJA2O43164 708 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 ERCC3P19447 782 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 OTOP1Q7RTM1 612 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 CEP57Q86XR8 500 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 CCDC155Q8N6L0 562 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 LPAR1Q92633 364 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 TBC1D7Q9P0N9 293 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 ODF2LQ9ULJ1 636 aa14.43□□□□□ -0.1
SCAMP4-207ENST00000472442 FTCDO95954 541 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 MYCNP04198 464 aaPredicted RBP14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 CLEC4DQ8WXI8 215 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 NDST4Q9H3R1 872 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 EMILIN3Q9NT22 766 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 RGL1Q9NZL6 768 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 COL20A1Q9P218 1284 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 GGA2Q9UJY4 613 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 CCPG1Q9ULG6 757 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 FRMD3A2A2Y4 597 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 NFIBO00712 420 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 PSMD10O75832 226 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 HSD17B4P51659 736 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 PABPC4Q13310 644 aaKnown RBP eCLIP14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 MTMR2Q13614 643 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 VWA3BQ502W6 1294 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 FAM26FQ5R3K3 315 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 ERMNQ8TAM6 284 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 WHAMMQ8TF30 809 aa14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 EIF2AK1Q9BQI3 630 aaKnown RBP14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
SCAMP4-207ENST00000472442 GOLGA6L7A0A1B0GV03 622 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 GOLGA6L10A6NI86 522 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 SNCBQ16143 134 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 ZCWPW2Q504Y3 356 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 CEP55Q53EZ4 464 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 LRRC55Q6ZSA7 311 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 SYT2Q8N9I0 419 aaPredicted RBP14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 OR2W6PQ8NHA6 318 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 TRPM4Q8TD43 1214 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 IQCDQ96DY2 449 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 HOOK2Q96ED9 719 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 TMBIM4Q9HC24 238 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 DDX20Q9UHI6 824 aaKnown RBP14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 TSKSQ9UJT2 592 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 PACSIN2Q9UNF0 486 aaPredicted RBP14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 BACH1O14867 736 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 PALMO75781 387 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 VCAM1P19320 739 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 DRP2Q13474 957 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 WLSQ5T9L3 541 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 ANGEL2Q5VTE6 544 aaKnown RBP14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 CYB5D1Q6P9G0 228 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 PARP9Q8IXQ6 854 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 MYOCDQ8IZQ8 938 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 SLC5A5Q92911 643 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 HSD17B14Q9BPX1 270 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 OSBPL7Q9BZF2 842 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 HAUS2Q9NVX0 235 aa14.41□□□□□ -0.1
SCAMP4-207ENST00000472442 DNM1LO00429 736 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 RAD51CO43502 376 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 ARP10275 920 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 LRRC63Q05C16 580 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 GIT2Q14161 759 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 QPCTQ16769 361 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 BAP1Q92560 729 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 ACTR5Q9H9F9 607 aaPredicted RBP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 SLC38A10Q9HBR0 1119 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 GINM1Q9NU53 330 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 RNF14Q9UBS8 474 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 DNM3Q9UQ16 869 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 PITPNM2Q9BZ72 1349 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 CLSTN1O94985 981 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 HSPA9P38646 679 aaKnown RBP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 ASTE1Q2TB18 679 aaPredicted RBP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 HERC4Q5GLZ8 1057 aaPredicted RBP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 FAM228AQ86W67 206 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 KLHL7Q8IXQ5 586 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 CCDC65Q8IXS2 484 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 FUKQ8N0W3 1084 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 CPXCR1Q8N123 301 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 ARFGAP2Q8N6H7 521 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 C1orf131Q8NDD1 294 aaKnown RBP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 SCLT1Q96NL6 688 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 BCAS3Q9H6U6 928 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 RAVER2Q9HCJ3 691 aaKnown RBP14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 ZNF112Q9UJU3 913 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 GMNCA6NCL1 334 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 SLITRK3O94933 977 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 MYZAPP0CAP1 466 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 TMOD1P28289 359 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 SPP2Q13103 211 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 PPP2R5CQ13362 524 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
SCAMP4-207ENST00000472442 RNF10Q8N5U6 811 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms