RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 CAGE1Q8TC20 777 aa17.8■□□□□ 0.44
PCOLCE-205ENST00000472348 MAP7D2Q96T17 732 aa17.8■□□□□ 0.44
PCOLCE-205ENST00000472348 RUSC1Q9BVN2 902 aa17.8■□□□□ 0.44
PCOLCE-205ENST00000472348 OLFML3Q9NRN5 406 aa17.8■□□□□ 0.44
PCOLCE-205ENST00000472348 COL4A3BPQ9Y5P4 624 aa17.8■□□□□ 0.44
PCOLCE-205ENST00000472348 SQORQ9Y6N5 450 aa17.8■□□□□ 0.44
PCOLCE-205ENST00000472348 TMEM150BA6NC51 233 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 H0YCG3 227 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 PITPNM1O00562 1244 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 TREHO43280 583 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 USO1O60763 962 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 PARNO95453 639 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 DPYDQ12882 1025 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 MAPK7Q13164 816 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 PSMD2Q13200 908 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 RBM43Q6ZSC3 357 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 UNC13DQ70J99 1090 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 ZNF410Q86VK4 478 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 CCDC65Q8IXS2 484 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 CCDC155Q8N6L0 562 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 SPIRE2Q8WWL2 714 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 PSPC1Q8WXF1 523 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 CCDC47Q96A33 483 aaKnown RBP17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 CTAGE1Q96RT6 745 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 CLSTN2Q9H4D0 955 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 ST6GALNAC4Q9H4F1 302 aa17.79■□□□□ 0.44
PCOLCE-205ENST00000472348 DCDC2CA8MYV0 355 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 SMC2O95347 1197 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 SSBP05455 408 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 CYP2C9P11712 490 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 NAMPTP43490 491 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 SARSP49591 514 aaKnown RBP17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 EHHADHQ08426 723 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 HIC1Q14526 733 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 FAM47CQ5HY64 1035 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 FAM26DQ5JW98 314 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 KIAA0319LQ8IZA0 1049 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 TRIML1Q8N9V2 468 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 REEP2Q9BRK0 252 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 NUP62CLQ9H1M0 184 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 PARVGQ9HBI0 331 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 RMND1Q9NWS8 449 aa17.78■□□□□ 0.44
PCOLCE-205ENST00000472348 SIP14410 1827 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 B4GALT4O60513 344 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 LETM1O95202 739 aaPredicted RBP17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 KRT18P05783 430 aaKnown RBP17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 PLS3P13797 630 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 IGBP1P78318 339 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 MKRN4PQ13434 485 aaPredicted RBP17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 ALCAMQ13740 583 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 TFDP1Q14186 410 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 DAW1Q8N136 415 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 DIS3LQ8TF46 1054 aaKnown RBP17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 TRAPPC12Q8WVT3 735 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 IFT74Q96LB3 600 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 NOD1Q9Y239 953 aa17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 TNRC18O15417 2968 aaPredicted RBP17.77■□□□□ 0.44
PCOLCE-205ENST00000472348 TANC1Q9C0D5 1861 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 A0A087WWV3 80 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 HIP1RO75146 1068 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 TBCAO75347 108 aaKnown RBP17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 RHOBTB3O94955 611 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 AFMP43652 599 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 SMTNP53814 917 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 BFSP2Q13515 415 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 TRIM71Q2Q1W2 868 aaKnown RBP17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 COBLL1Q53SF7 1204 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 CCDC183Q5T5S1 534 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 TRMT1LQ7Z2T5 733 aaKnown RBP17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 USP38Q8NB14 1042 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 HVCN1Q96D96 273 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 SH2D3AQ9BRG2 576 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 HTATIP2Q9BUP3 242 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 KIAA1468Q9P260 1216 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 SUCLA2Q9P2R7 463 aaPredicted RBP17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 ALPK3Q96L96 1907 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 PDE4DIPQ5VU43 2346 aa17.76■□□□□ 0.43
PCOLCE-205ENST00000472348 KLRC4O43908 158 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 FAM13AO94988 1023 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 PPP1R2P41236 205 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 EFNA5P52803 228 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 ASIC1P78348 528 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 DMP1Q13316 513 aaPredicted RBP17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 CUL4BQ13620 913 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 DHX8Q14562 1220 aaKnown RBP17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 METTL13Q8N6R0 699 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 PRPF31Q8WWY3 499 aaKnown RBP17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 POLR3FQ9H1D9 316 aaPredicted RBP17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 C2orf40Q9H1Z8 148 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 SUGCTQ9HAC7 445 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 PANK4Q9NVE7 773 aa17.75■□□□□ 0.43
PCOLCE-205ENST00000472348 M0QZ92 97 aa17.74■□□□□ 0.43
PCOLCE-205ENST00000472348 TRAK2O60296 914 aa17.74■□□□□ 0.43
PCOLCE-205ENST00000472348 RPN1P04843 607 aaKnown RBP17.74■□□□□ 0.43
PCOLCE-205ENST00000472348 GLRA2P23416 452 aa17.74■□□□□ 0.43
PCOLCE-205ENST00000472348 GPC3P51654 580 aa17.74■□□□□ 0.43
PCOLCE-205ENST00000472348 CRYBB1P53674 252 aaPredicted RBP17.74■□□□□ 0.43
PCOLCE-205ENST00000472348 NCKAP1LP55160 1127 aa17.74■□□□□ 0.43
PCOLCE-205ENST00000472348 FAAP100Q0VG06 881 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms