RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 SMIM10L2BP0DMW5 78 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 PLS3P13797 630 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 IDEP14735 1019 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 ARL2P36404 184 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 SMTNP53814 917 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 STX1AQ16623 288 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 HERC4Q5GLZ8 1057 aaPredicted RBP21.01■□□□□ 0.95
SNX4-203ENST00000471751 CXCL17Q6UXB2 119 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 NME8Q8N427 588 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 TMEM106CQ9BVX2 250 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 XPNPEP1Q9NQW7 623 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 PCDHA2Q9Y5H9 948 aa21.01■□□□□ 0.95
SNX4-203ENST00000471751 SMIM35A0A1B0GVV1 85 aa21■□□□□ 0.95
SNX4-203ENST00000471751 HIP1RO75146 1068 aa21■□□□□ 0.95
SNX4-203ENST00000471751 C22orf31O95567 290 aa21■□□□□ 0.95
SNX4-203ENST00000471751 EN2P19622 333 aaPredicted RBP21■□□□□ 0.95
SNX4-203ENST00000471751 KLRC1P26715 233 aa21■□□□□ 0.95
SNX4-203ENST00000471751 COASYQ13057 564 aa21■□□□□ 0.95
SNX4-203ENST00000471751 MAPK7Q13164 816 aa21■□□□□ 0.95
SNX4-203ENST00000471751 MTFR1Q15390 333 aa21■□□□□ 0.95
SNX4-203ENST00000471751 FOXR2Q6PJQ5 311 aa21■□□□□ 0.95
SNX4-203ENST00000471751 MTHFD1LQ6UB35 978 aa21■□□□□ 0.95
SNX4-203ENST00000471751 LINC01465Q8N7H1 131 aa21■□□□□ 0.95
SNX4-203ENST00000471751 IFT74Q96LB3 600 aa21■□□□□ 0.95
SNX4-203ENST00000471751 DEFB118Q96PH6 123 aa21■□□□□ 0.95
SNX4-203ENST00000471751 NAT10Q9H0A0 1025 aaKnown RBP21■□□□□ 0.95
SNX4-203ENST00000471751 C17orf102A2RUQ5 167 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 TMEM150BA6NC51 233 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 GJA8P48165 433 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 TYRO3Q06418 890 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 STIM1Q13586 685 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 FAM26FQ5R3K3 315 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 TAF2Q6P1X5 1199 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 RPAINQ86UA6 219 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 DAW1Q8N136 415 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 MYCT1Q8N699 235 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 SLC43A3Q8NBI5 491 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 PSPC1Q8WXF1 523 aaKnown RBP20.99■□□□□ 0.95
SNX4-203ENST00000471751 GTF2IRD1Q9UHL9 959 aa20.99■□□□□ 0.95
SNX4-203ENST00000471751 EVPLQ92817 2033 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 EIF3DO15371 548 aaKnown RBP eCLIP20.98■□□□□ 0.95
SNX4-203ENST00000471751 NAMPTP43490 491 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 DMP1Q13316 513 aaPredicted RBP20.98■□□□□ 0.95
SNX4-203ENST00000471751 NBPF20Q3BBV1 942 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 ODR4Q5SWX8 454 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 MARCH8Q5T0T0 291 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 FAM102BQ5T8I3 360 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 EFCAB12Q6NXP0 572 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 TRMT1LQ7Z2T5 733 aaKnown RBP20.98■□□□□ 0.95
SNX4-203ENST00000471751 HVCN1Q96D96 273 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 NFKBIZQ9BYH8 718 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 PCDHB13Q9Y5F0 798 aa20.98■□□□□ 0.95
SNX4-203ENST00000471751 UBE4BO95155 1302 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.97■□□□□ 0.95
SNX4-203ENST00000471751 ERCC5P28715 1186 aaPredicted RBP20.97■□□□□ 0.95
SNX4-203ENST00000471751 CASP1P29466 404 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 IRX5P78411 483 aaPredicted RBP20.97■□□□□ 0.95
SNX4-203ENST00000471751 ITGA7Q13683 1181 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 TFDP1Q14186 410 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 FAM43BQ6ZT52 329 aaPredicted RBP20.97■□□□□ 0.95
SNX4-203ENST00000471751 ZNF720Q7Z2F6 126 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 FAM178BQ8IXR5 827 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 GUF1Q8N442 669 aaKnown RBP20.97■□□□□ 0.95
SNX4-203ENST00000471751 U2AF1L4Q8WU68 220 aaKnown RBP20.97■□□□□ 0.95
SNX4-203ENST00000471751 LMBR1Q8WVP7 490 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 DHTKD1Q96HY7 919 aaPredicted RBP20.97■□□□□ 0.95
SNX4-203ENST00000471751 BPIFA3Q9BQP9 254 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 SETD4Q9NVD3 440 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 HDAC6Q9UBN7 1215 aa20.97■□□□□ 0.95
SNX4-203ENST00000471751 NPHP3-ACAD11A0A0J9YXS1 232 aa20.96■□□□□ 0.95
SNX4-203ENST00000471751 A0A0U1RQG5 324 aaPredicted RBP20.96■□□□□ 0.95
SNX4-203ENST00000471751 SNRPFP62306 86 aaKnown RBP20.96■□□□□ 0.95
SNX4-203ENST00000471751 PCBP1Q15365 356 aaKnown RBP eCLIP20.96■□□□□ 0.95
SNX4-203ENST00000471751 C1orf53Q5VUE5 145 aa20.96■□□□□ 0.95
SNX4-203ENST00000471751 ERCC4Q92889 916 aaPredicted RBP20.96■□□□□ 0.95
SNX4-203ENST00000471751 MAP7D2Q96T17 732 aa20.96■□□□□ 0.95
SNX4-203ENST00000471751 SH2D3AQ9BRG2 576 aa20.96■□□□□ 0.95
SNX4-203ENST00000471751 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
SNX4-203ENST00000471751 STARD7Q9NQZ5 370 aa20.96■□□□□ 0.95
SNX4-203ENST00000471751 EFNA5P52803 228 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 NCKAP1LP55160 1127 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 GTF2BQ00403 316 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 STK4Q13043 487 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 BMT2Q1RMZ1 405 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 ZNF410Q86VK4 478 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 IFNLR1Q8IU57 520 aaPredicted RBP20.95■□□□□ 0.94
SNX4-203ENST00000471751 ZNF507Q8TCN5 953 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 FIZ1Q96SL8 496 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 STRA6Q9BX79 667 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 POLR3FQ9H1D9 316 aaPredicted RBP20.95■□□□□ 0.94
SNX4-203ENST00000471751 C2orf40Q9H1Z8 148 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 TMEM134Q9H6X4 195 aa20.95■□□□□ 0.94
SNX4-203ENST00000471751 MRPL44Q9H9J2 332 aaKnown RBP20.95■□□□□ 0.94
SNX4-203ENST00000471751 SUCLA2Q9P2R7 463 aaPredicted RBP20.95■□□□□ 0.94
SNX4-203ENST00000471751 A0A1W2PQ45 241 aaPredicted RBP20.94■□□□□ 0.94
SNX4-203ENST00000471751 A0A1W2PQY0 241 aa20.94■□□□□ 0.94
SNX4-203ENST00000471751 RSPH10B2B2RC85 870 aa20.94■□□□□ 0.94
SNX4-203ENST00000471751 CAND2O75155 1236 aa20.94■□□□□ 0.94
SNX4-203ENST00000471751 TFRCP02786 760 aaKnown RBP20.94■□□□□ 0.94
SNX4-203ENST00000471751 RSPH10BP0C881 870 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms