RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 IMPDH2P12268 514 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 CDC37Q16543 378 aaPredicted RBP14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 LVRNQ6Q4G3 990 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 RUBCNLQ9H714 662 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MLXIPLQ9NP71 852 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SAMSN1Q9NSI8 373 aaKnown RBP14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ADCY9O60503 1353 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PLCG1P19174 1290 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PRAMEP78395 509 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MTMR1Q13613 665 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SPDYAQ5MJ70 313 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PDIK1LQ8N165 341 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SERPINI1Q99574 410 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ADA2Q9NZK5 511 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 STX18Q9P2W9 335 aaKnown RBP14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 CUL7Q14999 1698 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SOX11P35716 441 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 RFX8Q6ZV50 586 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ARHGAP18Q8N392 663 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ZC3H15Q8WU90 426 aaKnown RBP14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ANKRD49Q8WVL7 239 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ZC3H4Q9UPT8 1303 aaKnown RBP14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MAP3K1Q13233 1512 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MORF4L2Q15014 288 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MAPK6Q16659 721 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ZNF772Q68DY9 489 aaPredicted RBP14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 STRIP2Q9ULQ0 834 aa14.12□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 IL13P35225 146 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SMARCAD1Q9H4L7 1026 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 HAUS4Q9H6D7 363 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 EMILIN3Q9NT22 766 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MCF2P10911 925 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PDIA3P30101 505 aaKnown RBP14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SYCP2LQ5T4T6 812 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MFSD4BQ5TF39 518 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 BHMTQ93088 406 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MAN1C1Q9NR34 630 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 RNF181Q9P0P0 153 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PHKG2P15735 406 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 P2RX5Q93086 422 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 BHMT2Q9H2M3 363 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 JRKLQ9Y4A0 524 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 RPRD2Q5VT52 1461 aaKnown RBP14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ADORA2BP29275 332 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 FAM83BQ5T0W9 1011 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PALMDQ9NP74 551 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PACSIN2Q9UNF0 486 aaPredicted RBP14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 GOLGA8RI6L899 631 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PGRMC1O00264 195 aaKnown RBP14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 COPB2P35606 906 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 NUDT18Q6ZVK8 323 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 CENPUQ71F23 418 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 C11orf74Q86VG3 221 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 DDIASQ8IXT1 998 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 BCL2L12Q9HB09 334 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PPARGC1AQ9UBK2 798 aaKnown RBP14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ZBTB1Q9Y2K1 713 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ZFYVE9O95405 1425 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 EXOC4Q96A65 974 aa14.11□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SEC31AO94979 1220 aaKnown RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 HOXD10P28358 340 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 GRIK1P39086 918 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TMEM270Q6UE05 265 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 BZW1Q7L1Q6 419 aaKnown RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ZNF304Q9HCX3 659 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TRAF3IP3Q9Y228 551 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PRR23D1E9PI22 279 aaPredicted RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 HMBSP08397 361 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PRR23D2P0DMB1 279 aaPredicted RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 HSPA1AP0DMV8 641 aaKnown RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 HSPA1BP0DMV9 641 aaKnown RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 CMA1P23946 247 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 CEP70Q8NHQ1 597 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 NRBP1Q9UHY1 535 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ABCC4O15439 1325 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SASH1O94885 1247 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 CARSP49589 748 aaKnown RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TTC8Q8TAM2 541 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 OTUB1Q96FW1 271 aaPredicted RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 KLC2Q9H0B6 622 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TJP3O95049 919 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 IRF1P10914 325 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 NUMBP49757 651 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 KLHL24Q6TFL4 600 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 PI16Q6UXB8 463 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TDRD7Q8NHU6 1098 aaKnown RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 FAM213AQ9BRX8 229 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SAYSD1Q9NPB0 183 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TMEM161AQ9NX61 479 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ARHGAP10A1A4S6 786 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SLC8A1P32418 973 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TDRD3Q9H7E2 651 aaKnown RBP14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 SATB2Q9UPW6 733 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 H0Y3Z8 333 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 LCP1P13796 627 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 MFN1Q8IWA4 741 aa14.1□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 ERFP50548 548 aa14.09□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 CCT7Q99832 543 aa14.09□□□□□ -0.15
NPHP3-ACAD11-201ENST00000471702 TOPORSQ9NS56 1045 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms