RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 LLPHQ9BRT6 129 aaKnown RBP26.25■■□□□ 1.79
RNF220-208ENST00000471494 DARSP14868 501 aaKnown RBP26.24■■□□□ 1.79
RNF220-208ENST00000471494 GATMP50440 423 aa26.24■■□□□ 1.79
RNF220-208ENST00000471494 CDC42EP1Q00587 391 aa26.24■■□□□ 1.79
RNF220-208ENST00000471494 DRP2Q13474 957 aa26.24■■□□□ 1.79
RNF220-208ENST00000471494 EPHA7Q15375 998 aa26.24■■□□□ 1.79
RNF220-208ENST00000471494 CALCRLQ16602 461 aa26.24■■□□□ 1.79
RNF220-208ENST00000471494 CEP89Q96ST8 783 aa26.24■■□□□ 1.79
RNF220-208ENST00000471494 PLVAPQ9BX97 442 aa26.24■■□□□ 1.79
RNF220-208ENST00000471494 IGKV6-21A0A0C4DH24 114 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 KCNQ1P51787 676 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 GUCY1B3Q02153 619 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 DSC3Q14574 896 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 C8orf76Q96K31 380 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 KIF2CQ99661 725 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 LXNQ9BS40 222 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 LMAN2LQ9H0V9 348 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 CYP26B1Q9NR63 512 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 SH2B1Q9NRF2 756 aaPredicted RBP26.23■■□□□ 1.79
RNF220-208ENST00000471494 TMEM161AQ9NX61 479 aa26.23■■□□□ 1.79
RNF220-208ENST00000471494 NEMFO60524 1076 aa26.22■■□□□ 1.79
RNF220-208ENST00000471494 MAFO75444 373 aaPredicted RBP26.22■■□□□ 1.79
RNF220-208ENST00000471494 ZSCAN20P17040 1043 aaPredicted RBP26.22■■□□□ 1.79
RNF220-208ENST00000471494 SPIRE1Q08AE8 756 aa26.22■■□□□ 1.79
RNF220-208ENST00000471494 SLC7A3Q8WY07 619 aa26.22■■□□□ 1.79
RNF220-208ENST00000471494 UHRF1Q96T88 793 aaPredicted RBP26.22■■□□□ 1.79
RNF220-208ENST00000471494 GCOM2Q9BZD3 368 aaPredicted RBP26.22■■□□□ 1.79
RNF220-208ENST00000471494 NSUN3Q9H649 340 aaKnown RBP26.22■■□□□ 1.79
RNF220-208ENST00000471494 ATP6V0A4Q9HBG4 840 aa26.22■■□□□ 1.79
RNF220-208ENST00000471494 SUCLA2Q9P2R7 463 aaPredicted RBP26.22■■□□□ 1.79
RNF220-208ENST00000471494 SPTBN5Q9NRC6 3674 aaKnown RBP26.22■■□□□ 1.79
RNF220-208ENST00000471494 XIRP2A4UGR9 3374 aa26.22■■□□□ 1.79
RNF220-208ENST00000471494 GRM6O15303 877 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 NPEPPSP55786 919 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 HMGN5P82970 282 aaKnown RBP26.21■■□□□ 1.79
RNF220-208ENST00000471494 C4orf19Q8IY42 314 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 P2RX5Q93086 422 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 CEP170P1Q96L14 293 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 ELAC1Q9H777 363 aaKnown RBP26.21■■□□□ 1.79
RNF220-208ENST00000471494 UBE2ZQ9H832 354 aaPredicted RBP26.21■■□□□ 1.79
RNF220-208ENST00000471494 RGL1Q9NZL6 768 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 WRAP73Q9P2S5 460 aaPredicted RBP26.21■■□□□ 1.79
RNF220-208ENST00000471494 PCDHA12Q9UN75 941 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 PPME1Q9Y570 386 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 PLXNA4Q9HCM2 1894 aa26.21■■□□□ 1.79
RNF220-208ENST00000471494 TBKBP1A7MCY6 615 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 BMP1P13497 986 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 RBM25P49756 843 aaKnown RBP26.2■■□□□ 1.78
RNF220-208ENST00000471494 POLGP54098 1239 aaPredicted RBP26.2■■□□□ 1.78
RNF220-208ENST00000471494 CYP4A11Q02928 519 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 TCEAL5Q5H9L2 206 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 RHPN2Q8IUC4 686 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 EXOC8Q8IYI6 725 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 DYDC2Q96IM9 177 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 ZSWIM4Q9H7M6 989 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 BDP1A6H8Y1 2624 aa26.2■■□□□ 1.78
RNF220-208ENST00000471494 A0A087WZ62 844 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 FGFR4P22455 802 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 YWHABP31946 246 aaKnown RBP26.19■■□□□ 1.78
RNF220-208ENST00000471494 RFC5P40937 340 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 FAM189BP81408 668 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 NAALADL2Q58DX5 795 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 SPOUT1Q5T280 376 aaKnown RBP26.19■■□□□ 1.78
RNF220-208ENST00000471494 FAM102BQ5T8I3 360 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 OTUD6AQ7L8S5 288 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 ZNF410Q86VK4 478 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 FAM184AQ8NB25 1140 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 NLRP4Q96MN2 994 aa26.19■■□□□ 1.78
RNF220-208ENST00000471494 FDXACB1Q9BRP7 624 aaPredicted RBP26.19■■□□□ 1.78
RNF220-208ENST00000471494 TTC12Q9H892 705 aaPredicted RBP26.19■■□□□ 1.78
RNF220-208ENST00000471494 TNFRSF10AO00220 468 aa26.18■■□□□ 1.78
RNF220-208ENST00000471494 WNT7AO00755 349 aa26.18■■□□□ 1.78
RNF220-208ENST00000471494 FGFR1P11362 822 aa26.18■■□□□ 1.78
RNF220-208ENST00000471494 ATP2B1P20020 1258 aa26.18■■□□□ 1.78
RNF220-208ENST00000471494 SFPQP23246 707 aaKnown RBP eCLIP26.18■■□□□ 1.78
RNF220-208ENST00000471494 CTTNQ14247 550 aaKnown RBP26.18■■□□□ 1.78
RNF220-208ENST00000471494 TPH2Q8IWU9 490 aa26.18■■□□□ 1.78
RNF220-208ENST00000471494 INO80BQ9C086 356 aaPredicted RBP26.18■■□□□ 1.78
RNF220-208ENST00000471494 ALG13Q9NP73 1137 aaKnown RBP26.18■■□□□ 1.78
RNF220-208ENST00000471494 DACT1Q9NYF0 836 aa26.18■■□□□ 1.78
RNF220-208ENST00000471494 PLAGL2Q9UPG8 496 aa26.18■■□□□ 1.78
RNF220-208ENST00000471494 HOXA2O43364 376 aa26.17■■□□□ 1.78
RNF220-208ENST00000471494 CSDE1O75534 798 aaKnown RBP26.17■■□□□ 1.78
RNF220-208ENST00000471494 CSPG5O95196 566 aa26.17■■□□□ 1.78
RNF220-208ENST00000471494 KCNA5P22460 613 aa26.17■■□□□ 1.78
RNF220-208ENST00000471494 TXKP42681 527 aa26.17■■□□□ 1.78
RNF220-208ENST00000471494 RABEP1Q15276 862 aa26.17■■□□□ 1.78
RNF220-208ENST00000471494 ZNF579Q8NAF0 562 aaKnown RBP26.17■■□□□ 1.78
RNF220-208ENST00000471494 NEK9Q8TD19 979 aa26.17■■□□□ 1.78
RNF220-208ENST00000471494 EIF2AK1Q9BQI3 630 aaKnown RBP26.17■■□□□ 1.78
RNF220-208ENST00000471494 UPF2Q9HAU5 1272 aaKnown RBP26.17■■□□□ 1.78
RNF220-208ENST00000471494 AAASQ9NRG9 546 aa26.17■■□□□ 1.78
RNF220-208ENST00000471494 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.16■■□□□ 1.78
RNF220-208ENST00000471494 MCM7P33993 719 aa26.16■■□□□ 1.78
RNF220-208ENST00000471494 GNL2Q13823 731 aaKnown RBP26.16■■□□□ 1.78
RNF220-208ENST00000471494 XKR9Q5GH70 373 aa26.16■■□□□ 1.78
RNF220-208ENST00000471494 ECHDC2Q86YB7 292 aa26.16■■□□□ 1.78
RNF220-208ENST00000471494 KSR1Q8IVT5 923 aa26.16■■□□□ 1.78
RNF220-208ENST00000471494 ABI1Q8IZP0 508 aa26.16■■□□□ 1.78
RNF220-208ENST00000471494 KLHL23Q8NBE8 558 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms