RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 KCNN1Q92952 543 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 EEF2KMTQ96G04 330 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 SPATA33Q96N06 139 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 CEP89Q96ST8 783 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 NOC4LQ9BVI4 516 aaKnown RBP10.33□□□□□ -0.76
VPS52-216ENST00000471309 DHX33Q9H6R0 707 aaKnown RBP10.33□□□□□ -0.76
VPS52-216ENST00000471309 TMEM206Q9H813 350 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 POLD4Q9HCU8 107 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 GPRC5CQ9NQ84 441 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 XPNPEP1Q9NQW7 623 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 PDGFCQ9NRA1 345 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 NRBP2Q9NSY0 501 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 CGNQ9P2M7 1197 aaKnown RBP10.33□□□□□ -0.76
VPS52-216ENST00000471309 KCNG1Q9UIX4 513 aa10.33□□□□□ -0.76
VPS52-216ENST00000471309 H0YCG3 227 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 NKRFO15226 690 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS52-216ENST00000471309 CA12O43570 354 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 NRDCO43847 1150 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 ZNF500O60304 480 aaPredicted RBP10.32□□□□□ -0.76
VPS52-216ENST00000471309 ALDH1A1P00352 501 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 NPTX2P47972 431 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 SMTNP53814 917 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 SNRPFP62306 86 aaKnown RBP10.32□□□□□ -0.76
VPS52-216ENST00000471309 GTF2BQ00403 316 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 UBXN1Q04323 297 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 PPP2R3AQ06190 1150 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 KCNA1Q09470 495 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 LRMPQ12912 555 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 NOGQ13253 232 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 ADAM9Q13443 819 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 MYBPC2Q14324 1141 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 CCDC40Q4G0X9 1142 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 VWA3BQ502W6 1294 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 FKBP15Q5T1M5 1219 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 HAUS6Q7Z4H7 955 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 CREBRFQ8IUR6 639 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 TRIM59Q8IWR1 403 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 PPTC7Q8NI37 304 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 SLC7A3Q8WY07 619 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 COPS5Q92905 334 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 ACCSQ96QU6 501 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 ERGIC2Q96RQ1 377 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 APBA2Q99767 749 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 NTPCRQ9BSD7 190 aaKnown RBP10.32□□□□□ -0.76
VPS52-216ENST00000471309 MKNK1Q9BUB5 465 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 GBP3Q9H0R5 595 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 AGPAT3Q9NRZ7 376 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 PYCARDQ9ULZ3 195 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS52-216ENST00000471309 THSD7BQ9C0I4 1608 aa10.32□□□□□ -0.76
VPS52-216ENST00000471309 GAS2O43903 313 aaKnown RBP10.31□□□□□ -0.76
VPS52-216ENST00000471309 MFAP3LO75121 409 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 TPM1P09493 284 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 RGS2P41220 211 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 ADCYAP1R1P41586 468 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 KCNJ6P48051 423 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 PEX3P56589 373 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 ACVR2BQ13705 512 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 PTPN21Q16825 1174 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 DUSP28Q4G0W2 176 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 TMEM63BQ5T3F8 832 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 OLFML2BQ68BL8 750 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 TRMT1LQ7Z2T5 733 aaKnown RBP10.31□□□□□ -0.76
VPS52-216ENST00000471309 FRMD5Q7Z6J6 570 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 PPFIBP1Q86W92 1011 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 TRIM50Q86XT4 487 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 CNGA4Q8IV77 575 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 SLC9A9Q8IVB4 645 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 MAP4K3Q8IVH8 894 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 C12orf56Q8IXR9 622 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 EXOC8Q8IYI6 725 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
VPS52-216ENST00000471309 RETREG2Q8NC44 543 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 KIAA1524Q8TCG1 905 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 GLG1Q92896 1179 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 IQCDQ96DY2 449 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 CCDC51Q96ER9 411 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 POLR3FQ9H1D9 316 aaPredicted RBP10.31□□□□□ -0.76
VPS52-216ENST00000471309 NDST4Q9H3R1 872 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 SMARCAD1Q9H4L7 1026 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 METTL14Q9HCE5 456 aaKnown RBP10.31□□□□□ -0.76
VPS52-216ENST00000471309 KMT5AQ9NQR1 393 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 ZHX1Q9UKY1 873 aaPredicted RBP10.31□□□□□ -0.76
VPS52-216ENST00000471309 FAM184BQ9ULE4 1060 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 EXOC7Q9UPT5 735 aa10.31□□□□□ -0.76
VPS52-216ENST00000471309 ZSWIM8A7E2V4 1837 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 RASSF10A6NK89 507 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 CCDC169A6NNP5 214 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 AKR1B15C9JRZ8 316 aaPredicted RBP10.3□□□□□ -0.76
VPS52-216ENST00000471309 PES1O00541 588 aaKnown RBP10.3□□□□□ -0.76
VPS52-216ENST00000471309 TNPO2O14787 897 aaKnown RBP10.3□□□□□ -0.76
VPS52-216ENST00000471309 SLC16A4O15374 487 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 MAFO75444 373 aaPredicted RBP10.3□□□□□ -0.76
VPS52-216ENST00000471309 AKAP3O75969 853 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 IGHA2P01877 340 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 GYPCP04921 128 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 LGALS2P05162 132 aa10.3□□□□□ -0.76
VPS52-216ENST00000471309 EPB41P11171 864 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms