RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CTIFO43310 598 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 PEX1O43933 1283 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 NR1D1P20393 614 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 RPS6P62753 249 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 GTF2IP78347 998 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 SPARCL1Q14515 664 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 LRRC41Q15345 812 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 PTPN21Q16825 1174 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 FAM26FQ5R3K3 315 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 TEX2Q8IWB9 1127 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 STAG2Q8N3U4 1231 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 C8orf58Q8NAV2 365 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 RNASE11Q8TAA1 199 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 NEK9Q8TD19 979 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 LARP4BQ92615 738 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 APPBP2Q92624 585 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 FAM227BQ96M60 508 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 TRIM54Q9BYV2 358 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 POLR3EQ9NVU0 708 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DCTN4Q9UJW0 460 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 EPN1Q9Y6I3 576 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 PLCH2O75038 1416 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 KRT37O76014 449 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 HAUS5O94927 633 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 CASP14P31944 242 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 SOAT1P35610 550 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 COPB1P53618 953 aaKnown RBP7.34□□□□□ -1.24
BRCA1-210ENST00000471181 ATP12AP54707 1039 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 PSMC6P62333 389 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 TNFAIP1Q13829 316 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 POTEEQ6S8J3 1075 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 EPM2AIP1Q7L775 607 aaPredicted RBP7.34□□□□□ -1.24
BRCA1-210ENST00000471181 PGBD3Q8N328 593 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 CABLES1Q8TDN4 633 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 SIKE1Q9BRV8 207 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 USP44Q9H0E7 712 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 ECT2Q9H8V3 914 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 SP110Q9HB58 689 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 NSMCE4AQ9NXX6 385 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF215Q9UL58 517 aaPredicted RBP7.34□□□□□ -1.24
BRCA1-210ENST00000471181 C9orf84Q5VXU9 1444 aa7.34□□□□□ -1.24
BRCA1-210ENST00000471181 UBE4BO95155 1302 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 MRPS35P82673 323 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 USP39Q53GS9 565 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 MEI1Q5TIA1 1274 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 EEPD1Q7L9B9 569 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 CDR2LQ86X02 465 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 HORMAD1Q86X24 394 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 PDIK1LQ8N165 341 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 SLC7A3Q8WY07 619 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 FAM162AQ96A26 154 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 CCT7Q99832 543 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 MAD2L2Q9UI95 211 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 ZNF197O14709 1029 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 EPB42P16452 691 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 NR2F2P24468 414 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 MARK3P27448 753 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 ERFP50548 548 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 PRAMEP78395 509 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 FASTKD1Q53R41 847 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 RARS2Q5T160 578 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 DCAF15Q66K64 600 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 CENPPQ6IPU0 288 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 CLEC4FQ8N1N0 589 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 UXS1Q8NBZ7 420 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 LINS1Q8NG48 757 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 EXD1Q8NHP7 514 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 GFM2Q969S9 779 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 SAMSN1Q9NSI8 373 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 UBAP1Q9NZ09 502 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 NCOA2Q15596 1464 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 ACEP12821 1306 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 IPO5O00410 1097 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 BIRC5O15392 142 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 MMEP08473 750 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 CCND2P30279 289 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 SERPINB1P30740 379 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 ALDH6A1Q02252 535 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 GTF2H3Q13889 308 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 MTERF2Q49AM1 385 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 CERKLQ49MI3 558 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 ANKRD40Q6AI12 368 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 MCTP2Q6DN12 878 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 KRT78Q8N1N4 520 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 PPP1R13BQ96KQ4 1090 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 ZSCAN10Q96SZ4 725 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 UNC45AQ9H3U1 944 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 RPF1Q9H9Y2 349 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 TROQ12816 1431 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 TARSL2A2RTX5 802 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 POTEFA5A3E0 1075 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 GTPBP6O43824 516 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 FKBP9O95302 570 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 COPB2P35606 906 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 AP1B1Q10567 949 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 KIZQ2M2Z5 673 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 SLC25A24Q6NUK1 477 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 FKBP9P1Q75LS8 142 aa7.33□□□□□ -1.24
BRCA1-210ENST00000471181 SYMPKQ92797 1274 aaKnown RBP7.33□□□□□ -1.24
BRCA1-210ENST00000471181 TADA1Q96BN2 335 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms