RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 GPR142Q7Z601 462 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 PLEKHH3Q7Z736 793 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 PPFIBP1Q86W92 1011 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 HOMER1Q86YM7 354 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 ADSSL1Q8N142 457 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 SAMD3Q8N6K7 520 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 MB21D1Q8N884 522 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 GIMAP8Q8ND71 665 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 TBCKQ8TEA7 893 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 LPAR1Q92633 364 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 USP6NLQ92738 828 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 ERCC4Q92889 916 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 GTPBP3Q969Y2 492 aaKnown RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 ZNF830Q96NB3 372 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 DEFB118Q96PH6 123 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 MTMR9Q96QG7 549 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 PIGSQ96S52 555 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 APBA2Q99767 749 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 C7orf25Q9BPX7 421 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 TUBB2BQ9BVA1 445 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 COL25A1Q9BXS0 654 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 TSPAN10Q9H1Z9 355 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 JMJD4Q9H9V9 463 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 CUEDC1Q9NWM3 386 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 MAGEC2Q9UBF1 373 aaPredicted RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 ADD3Q9UEY8 706 aaKnown RBP6.3□□□□□ -1.4
HDAC8-216ENST00000470998 OGDHLQ9ULD0 1010 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 LOC285556D6RIA3 1793 aa6.3□□□□□ -1.4
HDAC8-216ENST00000470998 FOCADQ5VW36 1801 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 PHIPQ8WWQ0 1821 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 CYP3A7-CYP3A51PA0A087WV96 503 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 SLC15A5A6NIM6 579 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 H0YGN5 161 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 MPHOSPH10O00566 681 aaKnown RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 CTIFO43310 598 aaKnown RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 STRNO43815 780 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 HOXC6P09630 235 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 GOLGA8HP0CJ92 632 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 ATP1A3P13637 1013 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 CYP2B6P20813 491 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 CYP3A7P24462 503 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 CCNE1P24864 410 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 PBX1P40424 430 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 AFMP43652 599 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 LRRC63Q05C16 580 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 COG2Q14746 738 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 NR1I3Q14994 352 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 DBN1Q16643 649 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 NAALADL2Q58DX5 795 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 FIGNQ5HY92 759 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 MFSD14CQ5VZR4 134 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 SLFN13Q68D06 897 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 ARMCX5Q6P1M9 558 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 SV2BQ7L1I2 683 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 FAM160B2Q86V87 743 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 ADGRF4Q8IZF3 695 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 LRRC47Q8N1G4 583 aaKnown RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 PDCL2Q8N4E4 241 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 SHCBP1Q8NEM2 672 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 ERMNQ8TAM6 284 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 TRIB2Q92519 343 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 VTI1AQ96AJ9 217 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 C16orf45Q96MC5 204 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 FAM20AQ96MK3 541 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 MBOAT7Q96N66 472 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 CNTNAP3BQ96NU0 1288 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 BAG1Q99933 345 aaPredicted RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 PAGR1Q9BTK6 254 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 NUP58Q9BVL2 599 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 AMNQ9BXJ7 453 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 CNTNAP3Q9BZ76 1288 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 TRIM9Q9C026 710 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 MAF1Q9H063 256 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 TMEM60Q9H2L4 133 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 PSTPIP2Q9H939 334 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 TXNRD2Q9NNW7 524 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 ZNHIT6Q9NWK9 470 aaKnown RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 SLC5A4Q9NY91 659 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 ZDHHC3Q9NYG2 299 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 MYO1AQ9UBC5 1043 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 LRWD1Q9UFC0 647 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 NRBP1Q9UHY1 535 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 NOVA2Q9UNW9 492 aaKnown RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 TMX2Q9Y320 296 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 IVNS1ABPQ9Y6Y0 642 aa6.29□□□□□ -1.4
HDAC8-216ENST00000470998 BAZ2AQ9UIF9 1905 aaKnown RBP6.29□□□□□ -1.4
HDAC8-216ENST00000470998 FAM181BA6NEQ2 426 aa6.28□□□□□ -1.4
HDAC8-216ENST00000470998 LGALS16A8MUM7 142 aa6.28□□□□□ -1.4
HDAC8-216ENST00000470998 WDR46O15213 610 aaKnown RBP6.28□□□□□ -1.4
HDAC8-216ENST00000470998 MFAP3LO75121 409 aa6.28□□□□□ -1.4
HDAC8-216ENST00000470998 CNMDO75829 334 aa6.28□□□□□ -1.4
HDAC8-216ENST00000470998 GNA14O95837 355 aa6.28□□□□□ -1.4
HDAC8-216ENST00000470998 CCDC175P0C221 793 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms