RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GPAA1O43292 621 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 EPN2O95208 641 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 LGALS2P05162 132 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 SLC3A2P08195 630 aaKnown RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 GNAT2P19087 354 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 PDE4AP27815 886 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 RPS9P46781 194 aaKnown RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 GPC5P78333 572 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 ARHGAP4P98171 946 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 TFAP4Q01664 338 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 FZD5Q13467 585 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 MLF2Q15773 248 aaPredicted RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 STXBP2Q15833 593 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 CCDC96Q2M329 555 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 LETM2Q2VYF4 491 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 C4orf17Q53FE4 359 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 ZBTB41Q5SVQ8 909 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 CELF3Q5SZQ8 465 aaKnown RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 SPOUT1Q5T280 376 aaKnown RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 FAM102BQ5T8I3 360 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 DAB2IPQ5VWQ8 1189 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 CEP68Q76N32 757 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 GPR149Q86SP6 731 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 TRIM50Q86XT4 487 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 EXOC6Q8TAG9 804 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 PIP4K2CQ8TBX8 421 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 SYTL5Q8TDW5 730 aaPredicted RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 OTUD7AQ8TE49 926 aaPredicted RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 LMBR1Q8WVP7 490 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 MRPS27Q92552 414 aaKnown RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 STRBPQ96SI9 672 aaKnown RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 MPHOSPH6Q99547 160 aaKnown RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 CWH43Q9H720 699 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 ZNF287Q9HBT7 754 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 GPCPD1Q9NPB8 672 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 DZANK1Q9NVP4 752 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 SETD2Q9BYW2 2564 aaPredicted RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 FNDC1Q4ZHG4 1894 aaPredicted RBP6.81□□□□□ -1.32
VARS-222ENST00000470953 PLIN4Q96Q06 1357 aa6.81□□□□□ -1.32
VARS-222ENST00000470953 LOXHD1Q8IVV2 1947 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 MYH15Q9Y2K3 1946 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 GGPS1O95749 300 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 TSPY3P0CV98 308 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 TSPY8P0CW00 308 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 SCG2P13521 617 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 EIF2AK2P19525 551 aaKnown RBP6.8□□□□□ -1.32
VARS-222ENST00000470953 CSRP3P50461 194 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 USH1GQ495M9 461 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 BTNL9Q6UXG8 535 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 LRRC55Q6ZSA7 311 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 TSHZ1Q6ZSZ6 1077 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 MRPL43Q8N983 215 aaKnown RBP6.8□□□□□ -1.32
VARS-222ENST00000470953 RILPL2Q969X0 211 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 EVI5LQ96CN4 794 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 RPP25Q9BUL9 199 aaKnown RBP6.8□□□□□ -1.32
VARS-222ENST00000470953 NAPBQ9H115 298 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 TMX1Q9H3N1 280 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 NGRNQ9NPE2 291 aaKnown RBP6.8□□□□□ -1.32
VARS-222ENST00000470953 FAM217BQ9NTX9 383 aaPredicted RBP6.8□□□□□ -1.32
VARS-222ENST00000470953 EPS15L1Q9UBC2 864 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 STX8Q9UNK0 236 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 CDY2AQ9Y6F7 541 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 DOCK8Q8NF50 2099 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 PLXNB3Q9ULL4 1909 aa6.8□□□□□ -1.32
VARS-222ENST00000470953 CACNA1EQ15878 2313 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 TSC2P49815 1807 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 LAMA4Q16363 1823 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 A0A087WV48 116 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 A0A1B0GTL3 188 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 FAM205CA6NFA0 338 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 CAPN8A6NHC0 703 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 B4DLN1 442 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 M0R2C6 588 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 SLC28A2O43868 658 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 MGEA5O60502 916 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 FGFR1P11362 822 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 UBA1P22314 1058 aaKnown RBP6.79□□□□□ -1.32
VARS-222ENST00000470953 MRPL12P52815 198 aaKnown RBP6.79□□□□□ -1.32
VARS-222ENST00000470953 PDE1AP54750 535 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 SIM1P81133 766 aaPredicted RBP6.79□□□□□ -1.32
VARS-222ENST00000470953 SATB1Q01826 763 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 PLCB3Q01970 1234 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 PRKCQQ04759 706 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 SLC44A4Q53GD3 710 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 TMC7Q7Z402 723 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 CHD1LQ86WJ1 897 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 PI4K2BQ8TCG2 481 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 NSUN6Q8TEA1 469 aaKnown RBP6.79□□□□□ -1.32
VARS-222ENST00000470953 DNAJB3Q8WWF6 145 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 AUTS2Q8WXX7 1259 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 NXPE3Q969Y0 559 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 RMDN3Q96TC7 470 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 CPVLQ9H3G5 476 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 PRORYQ9H606 182 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 DIAPH3Q9NSV4 1193 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 NXF1Q9UBU9 619 aaKnown RBP6.79□□□□□ -1.32
VARS-222ENST00000470953 LZTS1Q9Y250 596 aa6.79□□□□□ -1.32
VARS-222ENST00000470953 NUMBLQ9Y6R0 609 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms