RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MXD4Q14582 209 aaPredicted RBP10.77□□□□□ -0.69
CCM2-204ENST00000470837 TARBP2Q15633 366 aaKnown RBP10.77□□□□□ -0.69
CCM2-204ENST00000470837 GRIK4Q16099 956 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 KIAA0753Q2KHM9 967 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 MAP3K21Q5TCX8 1036 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 SPATA1Q5VX52 437 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 HS2ST1Q7LGA3 356 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 SYCP3Q8IZU3 236 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 DNAJC5GQ8N7S2 189 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 C7orf31Q8N865 590 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 DEPTORQ8TB45 409 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 NOC3LQ8WTT2 800 aaKnown RBP10.77□□□□□ -0.69
CCM2-204ENST00000470837 HPS3Q969F9 1004 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 VTI1AQ96AJ9 217 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 MAP7D2Q96T17 732 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 UPF3AQ9H1J1 476 aaKnown RBP10.77□□□□□ -0.69
CCM2-204ENST00000470837 RNPEPQ9H4A4 650 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 KMT5AQ9NQR1 393 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 MAGEC2Q9UBF1 373 aaPredicted RBP10.77□□□□□ -0.69
CCM2-204ENST00000470837 EXOC7Q9UPT5 735 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 UBE4BO95155 1302 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 NRCAMQ92823 1304 aa10.77□□□□□ -0.69
CCM2-204ENST00000470837 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 LRRIQ4A6NIV6 560 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 ASAP2O43150 1006 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 CALUO43852 315 aaPredicted RBP10.76□□□□□ -0.69
CCM2-204ENST00000470837 CABYRO75952 493 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 TPM3P06753 285 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 CCNE1P24864 410 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 KLRC1P26715 233 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 STX17P56962 302 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 CAP1Q01518 475 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 LRRC63Q05C16 580 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 EHHADHQ08426 723 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 STRN3Q13033 797 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 LRRC41Q15345 812 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 KNOP1Q1ED39 458 aaKnown RBP10.76□□□□□ -0.69
CCM2-204ENST00000470837 EFCAB12Q6NXP0 572 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 PPP4R3CPQ6ZMV5 832 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 CTU1Q7Z7A3 348 aaKnown RBP10.76□□□□□ -0.69
CCM2-204ENST00000470837 FAM114A1Q8IWE2 563 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 ZBTB8OSQ8IWT0 167 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 NELFCDQ8IXH7 590 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 ARRDC4Q8NCT1 418 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 KIAA0895Q8NCT3 520 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 GOLGA5Q8TBA6 731 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 SPIRE2Q8WWL2 714 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 P2RX5Q93086 422 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 TMEM143Q96AN5 459 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 SCLT1Q96NL6 688 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 ACCSQ96QU6 501 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 TMEM206Q9H813 350 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 POLD4Q9HCU8 107 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 GPRC5CQ9NQ84 441 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 AKT3Q9Y243 479 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 NFE2L3Q9Y4A8 694 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 PHLPP2Q6ZVD8 1323 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 KIAA1217Q5T5P2 1943 aa10.76□□□□□ -0.69
CCM2-204ENST00000470837 C17orf102A2RUQ5 167 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 KBTBD13C9JR72 458 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 SMIM10L2AP0DMW4 78 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 SMIM10L2BP0DMW5 78 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 MYBP10242 640 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
CCM2-204ENST00000470837 RPL13P26373 211 aaKnown RBP10.75□□□□□ -0.69
CCM2-204ENST00000470837 NMT1P30419 496 aaKnown RBP10.75□□□□□ -0.69
CCM2-204ENST00000470837 NAMPTP43490 491 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 NPTX2P47972 431 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 PURAQ00577 322 aaKnown RBP10.75□□□□□ -0.69
CCM2-204ENST00000470837 CDC42EP1Q00587 391 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 SPAG1Q07617 926 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 MAPK7Q13164 816 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 IQCB1Q15051 598 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 PKN2Q16513 984 aaKnown RBP10.75□□□□□ -0.69
CCM2-204ENST00000470837 ZNF720Q7Z2F6 126 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 HAUS6Q7Z4H7 955 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 CREBRFQ8IUR6 639 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 DHX40Q8IX18 779 aaKnown RBP10.75□□□□□ -0.69
CCM2-204ENST00000470837 CSGALNACT2Q8N6G5 542 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 SH3TC2Q8TF17 1288 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 HVCN1Q96D96 273 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 BICD1Q96G01 975 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 C2orf40Q9H1Z8 148 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 PDLIM7Q9NR12 457 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 SUCLA2Q9P2R7 463 aaPredicted RBP10.75□□□□□ -0.69
CCM2-204ENST00000470837 PCDHA2Q9Y5H9 948 aa10.75□□□□□ -0.69
CCM2-204ENST00000470837 DENND3A2RUS2 1198 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 MOXD2PA6NHM9 499 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 SLC16A4O15374 487 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 ADAMTS4O75173 837 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 PRPF6O94906 941 aaKnown RBP10.74□□□□□ -0.69
CCM2-204ENST00000470837 C22orf31O95567 290 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 SERPINC1P01008 464 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 ASGR1P07306 291 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 CST5P28325 142 aaPredicted RBP10.74□□□□□ -0.69
CCM2-204ENST00000470837 ARL2P36404 184 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 EFNA5P52803 228 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 NKX3-2P78367 333 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 FKBP3Q00688 224 aaKnown RBP10.74□□□□□ -0.69
CCM2-204ENST00000470837 HSP90AA2PQ14568 343 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms