RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 TRIM32Q13049 653 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 PLPPR4Q7Z2D5 763 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 HAUS6Q7Z4H7 955 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 DRC7Q8IY82 874 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 MSL3Q8N5Y2 521 aaKnown RBP9.18□□□□□ -0.94
GTF3A-206ENST00000470606 ZSWIM2Q8NEG5 633 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 PPTC7Q8NI37 304 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 ASAP3Q8TDY4 903 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 PPP1R13LQ8WUF5 828 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 TRIB2Q92519 343 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 GLG1Q92896 1179 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 APBA2Q99767 749 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 TUBGCP2Q9BSJ2 902 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 LARSQ9P2J5 1176 aaKnown RBP9.18□□□□□ -0.94
GTF3A-206ENST00000470606 USP20Q9Y2K6 914 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 MKI67P46013 3256 aaKnown RBP9.18□□□□□ -0.94
GTF3A-206ENST00000470606 SIP14410 1827 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 K7ENM7 598 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 PDXKO00764 312 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 AKAP3O75969 853 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 EDN1P05305 212 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 PTMAP06454 111 aaKnown RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 GLRA2P23416 452 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 ARL2P36404 184 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 KLK7P49862 253 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 GTF2BQ00403 316 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 LAMC2Q13753 1193 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 EDRF1Q3B7T1 1238 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 HS1BP3Q53T59 392 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 IQSEC1Q6DN90 963 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 CCDC155Q8N6L0 562 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 ATP8B4Q8TF62 1192 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 DRC1Q96MC2 740 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 CCDC43Q96MW1 224 aaKnown RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 NTPCRQ9BSD7 190 aaKnown RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 POLR3FQ9H1D9 316 aaPredicted RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 ST6GALNAC4Q9H4F1 302 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 ATP6V0A4Q9HBG4 840 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 CASP8AP2Q9UKL3 1982 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 IGKV6-21A0A0C4DH24 114 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 LGALS16A8MUM7 142 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 N4BP3O15049 544 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 DKC1O60832 514 aaKnown RBP eCLIP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 MAFO75444 373 aaPredicted RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 TRPA1O75762 1119 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 NR3C1P04150 777 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 GJB1P08034 283 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 MMP3P08254 477 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 NR2F2P24468 414 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 ADSSP30520 456 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 RGS2P41220 211 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 FLT3LGP49771 235 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 PRKCZQ05513 592 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 ADAM9Q13443 819 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 FAM160B1Q5W0V3 765 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 SLC39A4Q6P5W5 647 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 LRRC8AQ8IWT6 810 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 NOC3LQ8WTT2 800 aaKnown RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 SOCS4Q8WXH5 440 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
GTF3A-206ENST00000470606 BORCS6Q96GS4 357 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 TIPINQ9BVW5 301 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 AZI2Q9H6S1 392 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 AGPAT3Q9NRZ7 376 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 DMAC2Q9NW81 257 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 RNF186Q9NXI6 227 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 PYCARDQ9ULZ3 195 aa9.17□□□□□ -0.94
GTF3A-206ENST00000470606 ANKRD63C9JTQ0 380 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 DYNC1LI2O43237 492 aaPredicted RBP9.16□□□□□ -0.94
GTF3A-206ENST00000470606 CBFA2T2O43439 604 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 PPFIA4O75335 1185 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 GYPCP04921 128 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 MAPTP10636 758 aaKnown RBP9.16□□□□□ -0.94
GTF3A-206ENST00000470606 POLGP54098 1239 aaPredicted RBP9.16□□□□□ -0.94
GTF3A-206ENST00000470606 MARSP56192 900 aaKnown RBP9.16□□□□□ -0.94
GTF3A-206ENST00000470606 RTP1P59025 263 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 SPAG1Q07617 926 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 HIC1Q14526 733 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 SPECC1LQ69YQ0 1117 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 TRIM59Q8IWR1 403 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 C17orf53Q8N3J3 647 aaPredicted RBP9.16□□□□□ -0.94
GTF3A-206ENST00000470606 LRRC71Q8N4P6 559 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 MCPH1Q8NEM0 835 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 KIFAP3Q92845 792 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 TRIM44Q96DX7 344 aaPredicted RBP9.16□□□□□ -0.94
GTF3A-206ENST00000470606 CTAGE1Q96RT6 745 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 CBWD1Q9BRT8 395 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 SMARCAD1Q9H4L7 1026 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 SLC5A4Q9NY91 659 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 ARHGAP28Q9P2N2 729 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 ZKSCAN5Q9Y2L8 839 aa9.16□□□□□ -0.94
GTF3A-206ENST00000470606 DENND3A2RUS2 1198 aa9.15□□□□□ -0.94
GTF3A-206ENST00000470606 A6NJR5 290 aa9.15□□□□□ -0.94
GTF3A-206ENST00000470606 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.94
GTF3A-206ENST00000470606 CCDC169A6NNP5 214 aa9.15□□□□□ -0.94
GTF3A-206ENST00000470606 EPHB6O15197 1021 aa9.15□□□□□ -0.94
GTF3A-206ENST00000470606 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms