RNA–Protein interactions for RNA: ENST00000470472.5

SFPQ-206, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 5

Gene SFPQ, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-206ENST00000470472 SHISA4Q96DD7 197 aa4.84□□□□□ -1.63
SFPQ-206ENST00000470472 MMP19Q99542 508 aa4.84□□□□□ -1.63
SFPQ-206ENST00000470472 LNPKQ9C0E8 428 aa4.84□□□□□ -1.63
SFPQ-206ENST00000470472 SIL1Q9H173 461 aa4.84□□□□□ -1.63
SFPQ-206ENST00000470472 GNL3LQ9NVN8 582 aaKnown RBP4.84□□□□□ -1.63
SFPQ-206ENST00000470472 YBX2Q9Y2T7 364 aaKnown RBP4.84□□□□□ -1.63
SFPQ-206ENST00000470472 ANKRD36CQ5JPF3 1778 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 ZNF804BA4D1E1 1349 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 PNMA6EA0A0J9YXQ4 647 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 NPHP3-ACAD11A0A0J9YXS1 232 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 CCDC85CA6NKD9 419 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 PPIP5K2O43314 1243 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 TBX1O43435 398 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 PSPNO60542 156 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 PDE8BO95263 885 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 SLC5A1P13866 664 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 PNLIPP16233 465 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 L1CAMP32004 1257 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 TRHRP34981 398 aaPredicted RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 RFX5P48382 616 aaPredicted RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 GPSM2P81274 684 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 CHRNDQ07001 517 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 CYP4F3Q08477 520 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 SSRP1Q08945 709 aaKnown RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 HDAC1Q13547 482 aaPredicted RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 LAPTM5Q13571 262 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 ATP2B3Q16720 1220 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 CCDC144BQ3MJ40 725 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 TIGD5Q53EQ6 642 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 CAVIN4Q5BKX8 364 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 SLC35F1Q5T1Q4 408 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 ACBD5Q5T8D3 534 aaPredicted RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 DPH6Q7L8W6 267 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 ZNF804AQ7Z570 1209 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 JAMLQ86YT9 394 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 SCUBE1Q8IWY4 988 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 NIM1KQ8IY84 436 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 CLASRPQ8N2M8 674 aaKnown RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 KREMEN2Q8NCW0 462 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 NPLOC4Q8TAT6 608 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 KLHDC4Q8TBB5 520 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 TBC1D16Q8TBP0 767 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 FRS2Q8WU20 508 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 KCTD13Q8WZ19 329 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 FAM168AQ92567 244 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 GCC1Q96CN9 775 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 GPATCH3Q96I76 525 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 JMJD8Q96S16 334 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 PSMD1Q99460 953 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 AARSD1Q9BTE6 412 aaKnown RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 LGR4Q9BXB1 951 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 VPS33BQ9H267 617 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 ZSWIM4Q9H7M6 989 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 GPRC5CQ9NQ84 441 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 ARHGEF4Q9NR80 690 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 GPR160Q9UJ42 338 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 EXOC6BQ9Y2D4 811 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 NOP58Q9Y2X3 529 aaKnown RBP4.83□□□□□ -1.64
SFPQ-206ENST00000470472 TAF6LQ9Y6J9 622 aa4.83□□□□□ -1.64
SFPQ-206ENST00000470472 TRAV20A0A0B4J274 112 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 ZNF503-AS2A6NEH8 195 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 ADCY3O60266 1144 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 FRAT2O75474 233 aaPredicted RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 TAF5LO75529 589 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 THBDP07204 575 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 SNRPB2P08579 225 aaKnown RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 IFIT2P09913 472 aaKnown RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 PLS3P13797 630 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 IARSP41252 1262 aaKnown RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 GRIA2P42262 883 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 TFCP2Q12800 502 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 UBE4AQ14139 1066 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 LRRC24Q50LG9 513 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 OLFM4Q6UX06 510 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 LPIN2Q92539 896 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 KIF1BPQ96EK5 621 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 MRFAP1L1Q96HT8 127 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 NEUROD6Q96NK8 337 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 RTFDC1Q9BY42 306 aaPredicted RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 PUS3Q9BZE2 481 aaKnown RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 LRRCC1Q9C099 1032 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 RNF32Q9H0A6 362 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 SLC6A17Q9H1V8 727 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 DCTPP1Q9H773 170 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 ZNF277Q9NRM2 450 aaPredicted RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 RNF181Q9P0P0 153 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 PA2G4Q9UQ80 394 aaKnown RBP4.82□□□□□ -1.64
SFPQ-206ENST00000470472 RIPOR2Q9Y4F9 1068 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 NRXN2Q9P2S2 1712 aa4.82□□□□□ -1.64
SFPQ-206ENST00000470472 AFDNP55196 1824 aaKnown RBP4.81□□□□□ -1.64
SFPQ-206ENST00000470472 KDM2BQ8NHM5 1336 aa4.81□□□□□ -1.64
SFPQ-206ENST00000470472 TNRC6CQ9HCJ0 1690 aaKnown RBP4.81□□□□□ -1.64
SFPQ-206ENST00000470472 CCDC163A0A0D9SF12 145 aa4.81□□□□□ -1.64
SFPQ-206ENST00000470472 A0A1W2PQ27 194 aa4.81□□□□□ -1.64
SFPQ-206ENST00000470472 A0A1W2PQ64 194 aa4.81□□□□□ -1.64
SFPQ-206ENST00000470472 A0A1W2PQC6 194 aa4.81□□□□□ -1.64
SFPQ-206ENST00000470472 A0A1W2PQD8 194 aa4.81□□□□□ -1.64
SFPQ-206ENST00000470472 DLX3O60479 287 aa4.81□□□□□ -1.64
SFPQ-206ENST00000470472 PABPC1P11940 636 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms