RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 SV2BQ7L1I2 683 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 RSPH3Q86UC2 560 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
SMC1A-206ENST00000470241 DAW1Q8N136 415 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 CCDC155Q8N6L0 562 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 ASAP3Q8TDY4 903 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 PRPF31Q8WWY3 499 aaKnown RBP11.72□□□□□ -0.53
SMC1A-206ENST00000470241 PSPC1Q8WXF1 523 aaKnown RBP11.72□□□□□ -0.53
SMC1A-206ENST00000470241 STAMQ92783 540 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 OSBPL7Q9BZF2 842 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
SMC1A-206ENST00000470241 TNMDQ9H2S6 317 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 LMBRD1Q9NUN5 540 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 KBTBD4Q9NVX7 518 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 KCND2Q9NZV8 630 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 USP25Q9UHP3 1055 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 ZMYND8Q9ULU4 1186 aaPredicted RBP11.72□□□□□ -0.53
SMC1A-206ENST00000470241 AKT3Q9Y243 479 aa11.72□□□□□ -0.53
SMC1A-206ENST00000470241 MYH9P35579 1960 aaKnown RBP11.71□□□□□ -0.53
SMC1A-206ENST00000470241 TCHHQ07283 1943 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 WDR81Q562E7 1941 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 ALPK3Q96L96 1907 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 RSPH10B2B2RC85 870 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 HIP1RO75146 1068 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 ZNF202O95125 648 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 IQCF3P0C7M6 154 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 RSPH10BP0C881 870 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 RAG1P15918 1043 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 SYN1P17600 705 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 GLRA2P23416 452 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 GPC3P51654 580 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 CCL23P55773 120 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 NLRP11P59045 1033 aaKnown RBP11.71□□□□□ -0.53
SMC1A-206ENST00000470241 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
SMC1A-206ENST00000470241 FAM160A1Q05DH4 1040 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 RAD51AP2Q09MP3 1159 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 LAMTOR4Q0VGL1 99 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 GIT2Q14161 759 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 MBTPS1Q14703 1052 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 GPNMBQ14956 572 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 KRBA2Q6ZNG9 492 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 RHPN2Q8IUC4 686 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 BSNDQ8WZ55 320 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 PAGE5Q96GU1 130 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.53
SMC1A-206ENST00000470241 PPP1R16BQ96T49 567 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 REEP2Q9BRK0 252 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 TIPINQ9BVW5 301 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 CELF4Q9BZC1 486 aaKnown RBP11.71□□□□□ -0.53
SMC1A-206ENST00000470241 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 MAGEF1Q9HAY2 307 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 PRKAG2Q9UGJ0 569 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 COL4A3BPQ9Y5P4 624 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 CDY2AQ9Y6F7 541 aa11.71□□□□□ -0.53
SMC1A-206ENST00000470241 ASAP2O43150 1006 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 NR1I2O75469 434 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 CAPSQ13938 189 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 KIZQ2M2Z5 673 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 MFSD5Q6N075 450 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 DYMQ7RTS9 669 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 GRAMD1CQ8IYS0 662 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 CEP57L1Q8IYX8 460 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 TMEM40Q8WWA1 233 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 DDX12PQ92771 950 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 KIFAP3Q92845 792 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 DNAJC19Q96DA6 116 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 VWCEQ96DN2 955 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 SCLYQ96I15 445 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 NR2E3Q9Y5X4 410 aa11.7□□□□□ -0.54
SMC1A-206ENST00000470241 MKI67P46013 3256 aaKnown RBP11.7□□□□□ -0.54
SMC1A-206ENST00000470241 A0A087WZ62 844 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 NBNO60934 754 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 KRT18P05783 430 aaKnown RBP11.69□□□□□ -0.54
SMC1A-206ENST00000470241 SRGAP2CP0DJJ0 459 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 CASP1P29466 404 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 AFMP43652 599 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 ZNF131P52739 623 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 CRYBB1P53674 252 aaPredicted RBP11.69□□□□□ -0.54
SMC1A-206ENST00000470241 CDC42EP1Q00587 391 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 CUL4BQ13620 913 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 MXD4Q14582 209 aaPredicted RBP11.69□□□□□ -0.54
SMC1A-206ENST00000470241 LPIN1Q14693 890 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 FBXO47Q5MNV8 452 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 CNNM4Q6P4Q7 775 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 ZNF410Q86VK4 478 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 RNF149Q8NC42 400 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 BADQ92934 168 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 NLRP4Q96MN2 994 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 OSMRQ99650 979 aa11.69□□□□□ -0.54
SMC1A-206ENST00000470241 C7orf25Q9BPX7 421 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms