RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TUBGCP5Q96RT8 1024 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 ELF4Q99607 663 aaPredicted RBP7.85□□□□□ -1.15
COL11A1-208ENST00000470170 ZNF341Q9BYN7 854 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 NELFAQ9H3P2 528 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 TLR9Q9NR96 1032 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 DENND2AQ9ULE3 1009 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 CD2APQ9Y5K6 639 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 HS3ST3A1Q9Y663 406 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 SLPIP03973 132 aa7.84□□□□□ -1.15
COL11A1-208ENST00000470170 DGKDQ16760 1214 aa7.84□□□□□ -1.15
COL11A1-208ENST00000470170 SORCS2Q96PQ0 1159 aa7.84□□□□□ -1.15
COL11A1-208ENST00000470170 H2AFY2Q9P0M6 372 aaPredicted RBP7.84□□□□□ -1.15
COL11A1-208ENST00000470170 MAGEC2Q9UBF1 373 aaPredicted RBP7.84□□□□□ -1.15
COL11A1-208ENST00000470170 RBM8AQ9Y5S9 174 aaKnown RBP7.84□□□□□ -1.15
COL11A1-208ENST00000470170 C2orf78A6NCI8 922 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 H2AFYO75367 372 aaKnown RBP7.83□□□□□ -1.16
COL11A1-208ENST00000470170 ADCY7P51828 1080 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 MYBPC3Q14896 1274 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 EPHA7Q15375 998 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 MIIPQ5JXC2 388 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 D2HGDHQ8N465 521 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 ZNF503Q96F45 646 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 OXSMQ9NWU1 459 aa7.83□□□□□ -1.16
COL11A1-208ENST00000470170 PMS2P1A4D2B8 440 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 NPIPB8E9PQR5 432 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 KPNA6O60684 536 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 ACRV1P26436 265 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 HIBADHP31937 336 aaKnown RBP7.82□□□□□ -1.16
COL11A1-208ENST00000470170 SESN2P58004 480 aaPredicted RBP7.82□□□□□ -1.16
COL11A1-208ENST00000470170 DGCR2P98153 550 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 SGMS1Q86VZ5 419 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 NME9Q86XW9 330 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 C1orf210Q8IVY1 113 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 IL17DQ8TAD2 202 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 RABGGTAQ92696 567 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 GCDHQ92947 438 aaPredicted RBP7.82□□□□□ -1.16
COL11A1-208ENST00000470170 LPPQ93052 612 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 NKD2Q969F2 451 aaPredicted RBP7.82□□□□□ -1.16
COL11A1-208ENST00000470170 GFM2Q969S9 779 aaKnown RBP7.82□□□□□ -1.16
COL11A1-208ENST00000470170 SLC7A6OSQ96CW6 309 aaPredicted RBP7.82□□□□□ -1.16
COL11A1-208ENST00000470170 RPL10LQ96L21 214 aaKnown RBP7.82□□□□□ -1.16
COL11A1-208ENST00000470170 KCMF1Q9P0J7 381 aa7.82□□□□□ -1.16
COL11A1-208ENST00000470170 A0A1W2PRX2 142 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 CYR61O00622 381 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 ATP2A2P16615 1042 aaKnown RBP7.81□□□□□ -1.16
COL11A1-208ENST00000470170 TCEA2Q15560 299 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 TKFCQ3LXA3 575 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 IGFL4Q6B9Z1 124 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 USP51Q70EK9 711 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 DYDC2Q96IM9 177 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 CSRNP2Q9H175 543 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 SLC6A15Q9H2J7 730 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 TOMM22Q9NS69 142 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 INTS7Q9NVH2 962 aaKnown RBP7.81□□□□□ -1.16
COL11A1-208ENST00000470170 POLR3BQ9NW08 1133 aaPredicted RBP7.81□□□□□ -1.16
COL11A1-208ENST00000470170 HECAQ9UBI9 543 aaPredicted RBP7.81□□□□□ -1.16
COL11A1-208ENST00000470170 DNAI1Q9UI46 699 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 SPO11Q9Y5K1 396 aa7.81□□□□□ -1.16
COL11A1-208ENST00000470170 FAM83GA6ND36 823 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 CAPN14A8MX76 684 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 C1SP09871 688 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 BPIFB4P59827 614 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 HHEXQ03014 270 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 TCIRG1Q13488 830 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 ADGRE4PQ86SQ3 457 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 HOMER1Q86YM7 354 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 NXPE1Q8N323 547 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 SYNPOQ8N3V7 929 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 C7orf31Q8N865 590 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 ANKRD53Q8N9V6 530 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
COL11A1-208ENST00000470170 RPGRQ92834 1020 aaKnown RBP7.8□□□□□ -1.16
COL11A1-208ENST00000470170 GPHA2Q96T91 129 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 FANCLQ9NW38 375 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 ZKSCAN5Q9Y2L8 839 aa7.8□□□□□ -1.16
COL11A1-208ENST00000470170 ZNF891A8MT65 544 aaPredicted RBP7.79□□□□□ -1.16
COL11A1-208ENST00000470170 APOL3O95236 402 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 NEK4P51957 841 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 BCAR1P56945 870 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 ADAM8P78325 824 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 PTH1RQ03431 593 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 KLF10Q13118 480 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 SPTY2D1Q68D10 685 aaPredicted RBP7.79□□□□□ -1.16
COL11A1-208ENST00000470170 BMP8AQ7Z5Y6 402 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 WDR92Q96MX6 357 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 ORAI3Q9BRQ5 295 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 POFUT1Q9H488 388 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 ING1Q9UK53 422 aaPredicted RBP7.79□□□□□ -1.16
COL11A1-208ENST00000470170 SH3BP1Q9Y3L3 701 aa7.79□□□□□ -1.16
COL11A1-208ENST00000470170 GAS7O60861 476 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 HMGA2P52926 109 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 ADCY2Q08462 1091 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 ADCY1Q08828 1119 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 CNNM4Q6P4Q7 775 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 UNQ6494/PRO21346Q6UXR6 183 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 C16orf86Q6ZW13 317 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 GAREM2Q75VX8 874 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 LRRTM3Q86VH5 581 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 PHYKPLQ8IUZ5 450 aa7.78□□□□□ -1.16
COL11A1-208ENST00000470170 APPBP2Q92624 585 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms