RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 LRRIQ3A6PVS8 624 aaPredicted RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 SH2B2O14492 632 aaPredicted RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 HADHAP40939 763 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 TXKP42681 527 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CCT5P48643 541 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CERKLQ49MI3 558 aaPredicted RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 NUDT18Q6ZVK8 323 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 TRAPPC11Q7Z392 1133 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 WRNIP1Q96S55 665 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 VPS16Q9H269 839 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 KIAA1257Q9ULG3 409 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 USP17L3A6NCW0 530 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 USP17L4A6NCW7 530 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 KLRF2D3W0D1 207 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CES2O00748 559 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 MAP3K7O43318 606 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 RHOXF2BP0C7M4 288 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CYP2C8P10632 490 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 PRLRP16471 622 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 MAGEA9P43362 315 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 SERPINB10P48595 397 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CDK17Q00537 523 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 SBK1Q52WX2 424 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 RESP18Q5W5W9 173 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 USP17L1Q7RTZ2 530 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 PATL1Q86TB9 770 aaKnown RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 ZNF354CQ86Y25 554 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 FAM186BQ8IYM0 893 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 TMEM35BQ8NCS4 154 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 RHOXF2Q9BQY4 288 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 C1QTNF1Q9BXJ1 281 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 UBN1Q9NPG3 1134 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 MIS18AQ9NYP9 233 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 IL1RAPL1Q9NZN1 696 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 GPR25O00155 361 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CTIFO43310 598 aaKnown RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 GRIN1Q05586 938 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 LAMC2Q13753 1193 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 EDRF1Q3B7T1 1238 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CCDC144BQ3MJ40 725 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 DNAL1Q4LDG9 190 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 ARHGEF16Q5VV41 709 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 APOA5Q6Q788 366 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CTAGE3PQ8IX95 158 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 RNF169Q8NCN4 708 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 ACRBPQ8NEB7 543 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 RIN3Q8TB24 985 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 ATOH1Q92858 354 aaPredicted RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 TSPAN17Q96FV3 270 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 SGSM3Q96HU1 749 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 PAWRQ96IZ0 340 aaKnown RBP6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 CCSER1Q9C0I3 900 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 GOLPH3LQ9H4A5 285 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 PLEKHA5Q9HAU0 1116 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 SERTAD1Q9UHV2 236 aa6.57□□□□□ -1.36
CCDC144A-212ENST00000470068 C1orf167Q5SNV9 1468 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 C16orf96A6NNT2 1141 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 LGALS16A8MUM7 142 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 H7C1W4 665 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ESRRBO95718 433 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 KRT8P05787 483 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 HARSP12081 509 aaKnown RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 GRK4P32298 578 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 GNGT1P63211 74 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 KARSQ15046 597 aaKnown RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 SLFN13Q68D06 897 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 RAB42Q8N4Z0 105 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 NUDCD1Q96RS6 583 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 BLOC1S6Q9UL45 172 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 PITPNM2Q9BZ72 1349 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ADCY3O60266 1144 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ZC3H11AO75152 810 aaKnown RBP eCLIP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 SASH1O94885 1247 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 GSTA2P09210 222 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 SCNN1DP51172 638 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 SATB1Q01826 763 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 GEN1Q17RS7 908 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 PRAMEF18Q5VWM3 479 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 CHST3Q7LGC8 479 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 HNRNPLLQ8WVV9 542 aaKnown RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 CNOT6LQ96LI5 555 aaKnown RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 NUDT12Q9BQG2 462 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 NAT9Q9BTE0 207 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 EML4Q9HC35 981 aaKnown RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 IP6K2Q9UHH9 426 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 STAP1Q9ULZ2 295 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 PCDHA7Q9UN72 937 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 DCCP43146 1447 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ZNF804BA4D1E1 1349 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ASNSP08243 561 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 TNNI1P19237 187 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 GARTP22102 1010 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 TKTP29401 623 aaKnown RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 NPEPPSP55786 919 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ICA1Q05084 483 aa6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 ZNF557Q8N988 423 aaPredicted RBP6.56□□□□□ -1.36
CCDC144A-212ENST00000470068 U2AF1L4Q8WU68 220 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms