RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 SASS6Q6UVJ0 657 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 EPM2AIP1Q7L775 607 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 EXOC8Q8IYI6 725 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 MCPH1Q8NEM0 835 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 GZF1Q9H116 711 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 AZI2Q9H6S1 392 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 DDX20Q9UHI6 824 aaKnown RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 TRIM17Q9Y577 477 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 SYNRGQ9UMZ2 1314 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 TMEM150BA6NC51 233 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 H3BRB1 525 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 SORBS3O60504 671 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 RARBP10826 455 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 SCP2P22307 547 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 ERCC5P28715 1186 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 ARL2P36404 184 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 PPP1R2P41236 205 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 PURAQ00577 322 aaKnown RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 SP4Q02446 784 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 COASYQ13057 564 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 IQCB1Q15051 598 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 DPCR1Q3MIW9 517 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 XKR9Q5GH70 373 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 UTP14CQ5TAP6 766 aaKnown RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 PLA2G4FQ68DD2 849 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 SESTD1Q86VW0 696 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 CCDC65Q8IXS2 484 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 ADSSL1Q8N142 457 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 KIAA0895Q8NCT3 520 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 TMEM174Q8WUU8 243 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 SPIRE2Q8WWL2 714 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 CEP170P1Q96L14 293 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 MED15Q96RN5 788 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 AP5M1Q9H0R1 490 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 TSPY26PQ9H489 355 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 RNPEPQ9H4A4 650 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 TUT1Q9H6E5 874 aaKnown RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 PAK6Q9NQU5 681 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-204ENST00000469232 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 COL4A3BPQ9Y5P4 624 aa9.05□□□□□ -0.96
NPHP3-204ENST00000469232 FRMPD3Q5JV73 1810 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 NPHP3-ACAD11A0A0J9YXS1 232 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 MBLAC1A4D2B0 266 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 IKBKBO14920 756 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 C22orf31O95567 290 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 CTCFP49711 727 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 STK4Q13043 487 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 PKN2Q16513 984 aaKnown RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 BRDTQ58F21 947 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 FAM26FQ5R3K3 315 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 DYMQ7RTS9 669 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 CTU1Q7Z7A3 348 aaKnown RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 GUF1Q8N442 669 aaKnown RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 KIFAP3Q92845 792 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 GLG1Q92896 1179 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 LENG1Q96BZ8 264 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 ARMC5Q96C12 935 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 TSEN34Q9BSV6 310 aaKnown RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 PARVGQ9HBI0 331 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 PANK4Q9NVE7 773 aa9.04□□□□□ -0.96
NPHP3-204ENST00000469232 ZNF215Q9UL58 517 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-204ENST00000469232 MYADML2A6NDP7 307 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 RRN3P2A6NIE6 340 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 RSPH10B2B2RC85 870 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 BHMG1C9JSJ3 638 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 MAGEB2O15479 319 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 HIP1RO75146 1068 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 RSPH10BP0C881 870 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 PLS3P13797 630 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 INSRRP14616 1297 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 POU5F1BQ06416 359 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 NCAPHQ15003 741 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 ZCWPW2Q504Y3 356 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 MARCH8Q5T0T0 291 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 CENPPQ6IPU0 288 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 FBXO46Q6PJ61 603 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 C11orf57Q6ZUT1 292 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 ZC3H3Q8IXZ2 948 aaKnown RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 SLC17A8Q8NDX2 589 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 FAM200AQ8TCP9 573 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 DHTKD1Q96HY7 919 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 DRC1Q96MC2 740 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 JPH2Q9BR39 696 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 ATP6V0A4Q9HBG4 840 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 HMX1Q9NP08 348 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 EXOC1Q9NV70 894 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 SEPT9Q9UHD8 586 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-204ENST00000469232 KCNG1Q9UIX4 513 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 UBE4BO95155 1302 aa9.03□□□□□ -0.96
NPHP3-204ENST00000469232 BIN1O00499 593 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 EIF3DO15371 548 aaKnown RBP eCLIP9.02□□□□□ -0.96
NPHP3-204ENST00000469232 CABYRO75952 493 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 SSBP05455 408 aaKnown RBP eCLIP9.02□□□□□ -0.96
NPHP3-204ENST00000469232 ZNF286BP0CG31 522 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 CAPN2P17655 700 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 HOXD13P35453 343 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms