RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 KCNT2Q6UVM3 1135 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 ECHDC2Q86YB7 292 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
HDAC3-204ENST00000469207 SUSD6Q92537 303 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
HDAC3-204ENST00000469207 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 MFSD14AQ96MC6 490 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 PHF7Q9BWX1 381 aaPredicted RBP13.87□□□□□ -0.19
HDAC3-204ENST00000469207 TMEM117Q9H0C3 514 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 TCEAL9Q9UHQ7 104 aa13.87□□□□□ -0.19
HDAC3-204ENST00000469207 CCDC196A0A1B0GTZ2 297 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 MAGEB2O15479 319 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 DTNBO60941 627 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 OATP04181 439 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 ZSCAN20P17040 1043 aaPredicted RBP13.86□□□□□ -0.19
HDAC3-204ENST00000469207 LAG3P18627 525 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 GNA11P29992 359 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 HSPA4P34932 840 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 GPC3P51654 580 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 SETQ01105 290 aaPredicted RBP13.86□□□□□ -0.19
HDAC3-204ENST00000469207 PLCB3Q01970 1234 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 PRKCEQ02156 737 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 BLOC1S2Q6QNY1 142 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
HDAC3-204ENST00000469207 PRSS33Q8NF86 280 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 FEZF2Q8TBJ5 459 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 HELQQ8TDG4 1101 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
HDAC3-204ENST00000469207 WDR64B1ANS9 1081 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 STBD1O95210 358 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 ATF7P17544 494 aaPredicted RBP13.85□□□□□ -0.19
HDAC3-204ENST00000469207 RPS6KB1P23443 525 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 TMOD1P28289 359 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 PDIA3P30101 505 aaKnown RBP13.85□□□□□ -0.19
HDAC3-204ENST00000469207 AKAP17AQ02040 695 aaKnown RBP13.85□□□□□ -0.19
HDAC3-204ENST00000469207 TMEM184AQ6ZMB5 413 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 TMC7Q7Z402 723 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
HDAC3-204ENST00000469207 SLC5A5Q92911 643 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 MAP7D2Q96T17 732 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 CEP131Q9UPN4 1083 aa13.85□□□□□ -0.19
HDAC3-204ENST00000469207 ZNF318Q5VUA4 2279 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 MEIS3P2A8K0S8 358 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 TDP2O95551 362 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 WEE2P0C1S8 567 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 DARSP14868 501 aaKnown RBP13.84□□□□□ -0.19
HDAC3-204ENST00000469207 NLRP5P59047 1200 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 MTERF2Q49AM1 385 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 LRCH2Q5VUJ6 765 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 BMP8AQ7Z5Y6 402 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 ZNF598Q86UK7 904 aaKnown RBP13.84□□□□□ -0.19
HDAC3-204ENST00000469207 KSR1Q8IVT5 923 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 AUTS2Q8WXX7 1259 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 LPPQ93052 612 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 FAM167AQ96KS9 214 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 ZNF558Q96NG5 402 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 SCLT1Q96NL6 688 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 AIFM3Q96NN9 605 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 CDCA3Q99618 268 aaPredicted RBP13.84□□□□□ -0.19
HDAC3-204ENST00000469207 AGXT2Q9BYV1 514 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
HDAC3-204ENST00000469207 PUF60Q9UHX1 559 aaKnown RBP13.84□□□□□ -0.19
HDAC3-204ENST00000469207 LZTS1Q9Y250 596 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 WDR81Q562E7 1941 aa13.84□□□□□ -0.19
HDAC3-204ENST00000469207 A0A087WZ62 844 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 A0A0U1RQF3 1178 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 GAS7O60861 476 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 PSMD10O75832 226 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 PDGFBP01127 241 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 IFNAR1P17181 557 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 CA8P35219 290 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 USP11P51784 963 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 VCPP55072 806 aaKnown RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 TOB2Q14106 344 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 TARBP2Q15633 366 aaKnown RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 MCTP2Q6DN12 878 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 PDE12Q6L8Q7 609 aaKnown RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 MIER3Q7Z3K6 550 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 TMEM173Q86WV6 379 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 ABI1Q8IZP0 508 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 SLC39A11Q8N1S5 342 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 C12orf76Q8N812 135 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 BICD2Q8TD16 824 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 TEKT3Q9BXF9 490 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 RNF26Q9BY78 433 aaPredicted RBP13.83□□□□□ -0.2
HDAC3-204ENST00000469207 KCNH6Q9H252 994 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 SPG21Q9NZD8 308 aa13.83□□□□□ -0.2
HDAC3-204ENST00000469207 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 CXCL14O95715 111 aa13.82□□□□□ -0.2
HDAC3-204ENST00000469207 BCAR1P56945 870 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms