RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
VPS13D-204ENST00000469054 ZNF365Q70YC5 407 aa13.29□□□□□ -0.28
VPS13D-204ENST00000469054 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
VPS13D-204ENST00000469054 SYT2Q8N9I0 419 aaPredicted RBP13.29□□□□□ -0.28
VPS13D-204ENST00000469054 MCPH1Q8NEM0 835 aa13.29□□□□□ -0.28
VPS13D-204ENST00000469054 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
VPS13D-204ENST00000469054 SPATA32Q96LK8 384 aa13.29□□□□□ -0.28
VPS13D-204ENST00000469054 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
VPS13D-204ENST00000469054 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS13D-204ENST00000469054 ADAMTS10Q9H324 1103 aa13.29□□□□□ -0.28
VPS13D-204ENST00000469054 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
VPS13D-204ENST00000469054 ASAP2O43150 1006 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 PLA2G4BP0C869 781 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 GHRP10912 638 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 PLCG1P19174 1290 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 ARL2P36404 184 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 GPC3P51654 580 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 LPIN1Q14693 890 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 SHHQ15465 462 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 PLEKHG4Q58EX7 1191 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 SHC4Q6S5L8 630 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 USP38Q8NB14 1042 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 PRPF31Q8WWY3 499 aaKnown RBP13.28□□□□□ -0.28
VPS13D-204ENST00000469054 SEPT8Q92599 483 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 OSMRQ99650 979 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 BLOC1S4Q9NUP1 217 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
VPS13D-204ENST00000469054 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
VPS13D-204ENST00000469054 MYH9P35579 1960 aaKnown RBP13.28□□□□□ -0.28
VPS13D-204ENST00000469054 TRIP12Q14669 1992 aaPredicted RBP13.27□□□□□ -0.28
VPS13D-204ENST00000469054 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS13D-204ENST00000469054 ACTN1P12814 892 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.29
VPS13D-204ENST00000469054 SLC12A3P55017 1021 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
VPS13D-204ENST00000469054 FAM102BQ5T8I3 360 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 ADALQ6DHV7 355 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 RINT1Q6NUQ1 792 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 CNKSR3Q6P9H4 555 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 CCDC73Q6ZRK6 1079 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 TSHZ1Q6ZSZ6 1077 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 C1orf186Q6ZWK4 172 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 OTOP2Q7RTS6 562 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 ZNF410Q86VK4 478 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 KSR1Q8IVT5 923 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 LRRC15Q8TF66 581 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 NLRP7Q8WX94 980 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 HERVK_113Q902F9 699 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 RAD54LQ92698 747 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 ZNF668Q96K58 619 aaPredicted RBP13.27□□□□□ -0.29
VPS13D-204ENST00000469054 SCLT1Q96NL6 688 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 IFIH1Q9BYX4 1025 aaKnown RBP13.27□□□□□ -0.29
VPS13D-204ENST00000469054 PANK2Q9BZ23 570 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 POLR3FQ9H1D9 316 aaPredicted RBP13.27□□□□□ -0.29
VPS13D-204ENST00000469054 AGO3Q9H9G7 860 aaKnown RBP13.27□□□□□ -0.29
VPS13D-204ENST00000469054 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 GPRC5CQ9NQ84 441 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 KAT6AQ92794 2004 aa13.27□□□□□ -0.29
VPS13D-204ENST00000469054 A0A087WZ62 844 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 ABHD14A-ACY1A0A1B0GW23 586 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 RPS6KA5O75582 802 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 SRGAP2CP0DJJ0 459 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 DARSP14868 501 aaKnown RBP13.26□□□□□ -0.29
VPS13D-204ENST00000469054 GLRA2P23416 452 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 LAMTOR4Q0VGL1 99 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 ASAP3Q8TDY4 903 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
VPS13D-204ENST00000469054 APBB2Q92870 758 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 NLRP4Q96MN2 994 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 FDXACB1Q9BRP7 624 aaPredicted RBP13.26□□□□□ -0.29
VPS13D-204ENST00000469054 RUSC1Q9BVN2 902 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 GCOM2Q9BZD3 368 aaPredicted RBP13.26□□□□□ -0.29
VPS13D-204ENST00000469054 MTIF3Q9H2K0 278 aaKnown RBP13.26□□□□□ -0.29
VPS13D-204ENST00000469054 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 KCND2Q9NZV8 630 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 STK17AQ9UEE5 414 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 PADI3Q9ULW8 664 aa13.26□□□□□ -0.29
VPS13D-204ENST00000469054 NOC2LQ9Y3T9 749 aaKnown RBP13.26□□□□□ -0.29
VPS13D-204ENST00000469054 LTBP2Q14767 1821 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 TNRC18O15417 2968 aaPredicted RBP13.25□□□□□ -0.29
VPS13D-204ENST00000469054 A0A087X0B3 334 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 A0A1W2PPC1 479 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 GPR182O15218 404 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 BAIAP3O94812 1187 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 GUCY2CP25092 1073 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 CD52P31358 61 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 POU5F1BQ06416 359 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 NFX1Q12986 1120 aaKnown RBP13.25□□□□□ -0.29
VPS13D-204ENST00000469054 IKBKEQ14164 716 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 TFDP1Q14186 410 aa13.25□□□□□ -0.29
VPS13D-204ENST00000469054 DHX8Q14562 1220 aaKnown RBP13.25□□□□□ -0.29
VPS13D-204ENST00000469054 MCM6Q14566 821 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms